Hs04023116_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48044744 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	XM_017026992.1			XP_016882481.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 ELSPBP1 PLA2G4C CABP5 LIG1 C19orf68 PLA2G4C-AS1
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	ATF5 SNAR-A1 RPL18 BSPH1 HRC SNAR-A13 SNAR-A6 MAMSTR LOC101928295 SCAF1 PIH1D1 C19orf73 SNORD35A CGB7 NUP62 SNAR-A8 CGB3 SNAR-A11 TMEM143 MIR150 SLC6A16 RUVBL2 SNAR-C3 DHDH LOC105447645 LOC101059948 SNRNP70 FUT2 SNAR-A7 TRPM4 MED25 C19orf68 LOC100287477 PRMT1 RPL13A EMP3 CD37 MIR6799 DKKL1 PTOV1-AS1 FUT1 LOC105372430 SPHK2 SNAR-C2 VRK3 PLA2G4C SNAR-C5 FLT3LG MIR5088 MIR4750 CARD8-AS1 HSD17B14 PTH2 FCGRT BCAT2 PNKP BCL2L12 CABP5 RCN3 CGB5 SNAR-C1 KDELR1 SNAR-A14 IZUMO1 CYTH2 TBC1D17 AP2A1 SNAR-C4 LIG1 BAX SNAR-A5 SNAR-A3 CGB2 PPFIA3 CCDC155 FUZ MIR4324 SNAR-A12 ADM5 MIR6800 SEC1P NUCB1 SNAR-A9 ALDH16A1 PLA2G4C-AS1 IRF3 LIN7B SLC17A7 KCNJ14 NTN5 TEAD2 SNAR-D CGB8 MIR4751 SNAR-B1 SNORD32A LMTK3 RASIP1 NOSIP ZNF473 CGB1 CARD8 PTOV1-AS2 LHB CPT1C GRWD1 FTL KCNA7 DBP PLEKHA4 CA11 SYNGR4 SNAR-G2 SIGLEC16 SNAR-A2 SPACA4 TULP2 RPS11 NTF4 GYS1 NUCB1-AS1 PTOV1 ZNF114 AKT1S1 SNAR-B2 ELSPBP1 MIR6798 IL4I1 FGF21 GFY GRIN2D PRRG2 PPP1R15A SULT2B1 RRAS FLJ26850 SNORD33 MIR4749 TSKS FAM83E CCDC114 SIGLEC11 PRR12 SNORD35B SNAR-A10 SNAR-A4 SNAR-G1 SNORD34
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	ZNF114 ELSPBP1 PLA2G4C GRIN2D CARD8 LIG1 C19orf68 CARD8-AS1 PLA2G4C-AS1 TMEM143 EMP3 CCDC114 CABP5 SYNGR4 KDELR1
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C CABP5 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	ELSPBP1 PLA2G4C CABP5 PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C2 SNAR-A1 BSPH1 SULT2A1 SNAR-A13 ELSPBP1 PLA2G4C SNAR-C5 SNAR-C4 SNAR-A3 PLA2G4C-AS1 CRX CABP5 SNAR-A2 TPRX1 SNAR-C1 SNAR-C3 LINC01595 SNAR-A12

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding