Hs04023827_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48043609 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AA318398.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C-AS1 C19orf68 BSPH1 LIG1 ELSPBP1 PLA2G4C CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	DHDH CGB7 ZNF473 LIG1 FUT1 GFY SPACA4 SIGLEC11 GRIN2D SNAR-A10 GYS1 PIH1D1 LMTK3 FTL NUP62 PLA2G4C-AS1 SNAR-A4 MIR6800 CCDC114 SNORD35B SNAR-A13 CGB8 AKT1S1 SNAR-A7 SNORD32A RASIP1 SNAR-A1 SNORD34 ELSPBP1 FUZ RUVBL2 MIR4751 KCNJ14 FAM83E SNAR-A3 KCNA7 MAMSTR VRK3 SULT2B1 LOC105447645 SNAR-A14 CA11 BCAT2 SNAR-B1 MIR150 CD37 HRC SNAR-C3 SNAR-G2 IZUMO1 SNAR-C4 FLT3LG RCN3 LOC101059948 PRRG2 DKKL1 PPP1R15A MIR6799 SNORD33 BCL2L12 SNAR-A6 CGB1 CPT1C NTF4 SEC1P CARD8 HSD17B14 SNAR-D MIR4750 SNAR-C5 TRPM4 RPL13A FUT2 ALDH16A1 LOC101928295 C19orf68 BAX KDELR1 LOC105372430 PLEKHA4 PTOV1-AS2 PTH2 PNKP RPL18 GRWD1 SNAR-A9 SNAR-A8 TSKS SNAR-G1 SNAR-C1 NOSIP SNAR-A2 CCDC155 RPS11 PLA2G4C ZNF114 C19orf73 CYTH2 CGB3 SLC6A16 NTN5 SNAR-C2 MIR5088 BSPH1 NUCB1-AS1 SNAR-A5 SCAF1 PRR12 NUCB1 EMP3 MIR4749 IRF3 SYNGR4 AP2A1 CABP5 CGB5 FLJ26850 TBC1D17 LIN7B SIGLEC16 PPFIA3 IL4I1 PTOV1 ATF5 LOC100287477 ADM5 PTOV1-AS1 CGB2 SNORD35A MIR4324 SPHK2 LHB SNAR-B2 SNRNP70 FCGRT TULP2 TMEM143 SNAR-A12 DBP MED25 TEAD2 SLC17A7 SNAR-A11 PRMT1 RRAS CARD8-AS1 FGF21 MIR6798
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	EMP3 C19orf68 SYNGR4 LIG1 ELSPBP1 PLA2G4C CABP5 KDELR1 ZNF114 TMEM143 GRIN2D CARD8 PLA2G4C-AS1 CCDC114 CARD8-AS1
nsv1062163	Chr.19:48040339 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 PLA2G4C CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
esv2619667	Chr.19:48043334 - 48044098 on Build GRCh38	Insertion	CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 PLA2G4C CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-C1 TPRX1 SNAR-A2 SNAR-A1 ELSPBP1 PLA2G4C CABP5 SNAR-C3 CRX SNAR-C4 SNAR-A12 SNAR-C2 SULT2A1 PLA2G4C-AS1 BSPH1 SNAR-A3 SNAR-C5 LINC01595 SNAR-A13

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding