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See other IRF3 CNV Assays ›
Gene Symbol
IRF3
Assay Reference Genome
Location

Chr.19:49661438 on build GRCh38
Cytoband
19q13.33
Assay ID Hs04032530_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 3661

Gene Name:

 interferon regulatory factor 3

Gene Aliases:

 IIAE7

Location:

 Chr.19:49659569-49665875 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
IRF3 NM_001197122.1 NP_001184051.1
NM_001197123.1 NP_001184052.1
NM_001197124.1 NP_001184053.1
NM_001197125.1 NP_001184054.1
NM_001197126.1 NP_001184055.1
NM_001197127.1 NP_001184056.1
NM_001197128.1 NP_001184057.1
NM_001571.5 NP_001562.1
NR_045568.1
XM_006723197.1 XP_006723260.1
XM_006723198.1 XP_006723261.1
XM_006723200.1 XP_006723263.1
XM_006723201.1 XP_006723264.1
XM_006723202.2 XP_006723265.1
XM_017026766.1 XP_016882255.1
XM_017026767.1 XP_016882256.1
AA568913.1
AB102886.1 BAD89415.1
AB102887.1 BAD89416.1
AK292027.1
AK314421.1
BC000660.2 AAH00660.1
BC009395.2 AAH09395.1
BC071721.1 AAH71721.1
BM477213.1
BU859806.1
HM357932.1
HM357933.1
HM357934.1
HM357935.1
HM357936.1
HM357937.1
Z56281.1 CAA91227.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRR12 PRRG2 NOSIP SCAF1 RRAS IRF3 CPT1C ADM5 BCL2L12 PRMT1 MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRR12 PRRG2 NOSIP SCAF1 RRAS IRF3 CPT1C ADM5 BCL2L12 PRMT1 MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss PRRG2 SNAR-C3 SPHK2 TBC1D17 FLT3LG CA11 FLJ26850 GYS1 SEC1P LOC105372430 SNAR-B2 CGB1 SNRNP70 SIGLEC16 BCAT2 SNAR-A4 CGB8 PLEKHA4 TRPM4 FGF21 FUT2 SULT2B1 GFY CCDC155 SLC17A7 NOSIP PTH2 FAM83E BAX CD37 SNAR-A2 NUCB1-AS1 CYTH2 ELSPBP1 DHDH SNAR-A14 SNAR-G2 MIR4750 CABP5 SNORD33 EMP3 SNAR-A10 BSPH1 MAMSTR FTL DKKL1 ADM5 IL4I1 LOC100287477 PRR12 AKT1S1 SNAR-A13 PIH1D1 NTF4 HSD17B14 SNORD34 SNAR-A5 CCDC114 BCL2L12 HRC SNAR-A1 SNORD35B RASIP1 SNAR-B1 SNORD32A PNKP SNAR-A6 TEAD2 RPL13A VRK3 NUCB1 TSKS SCAF1 RRAS PTOV1-AS1 CGB3 MIR150 IRF3 FUT1 KCNA7 MIR4751 PRMT1 LMTK3 SNAR-A7 ZNF114 SNAR-D SNAR-C4 KCNJ14 ZNF473 SNAR-A8 IZUMO1 MIR6798 LOC105447645 FCGRT LIN7B SYNGR4 SNAR-G1 MIR4324 SNAR-C2 PLA2G4C CGB7 TULP2 RPS11 KDELR1 NUP62 CPT1C PTOV1-AS2 CARD8 LIG1 NTN5 RCN3 LOC101059948 PLA2G4C-AS1 CGB5 SIGLEC11 SNAR-A3 PPP1R15A SPACA4 FUZ PTOV1 TMEM143 MIR6799 C19orf73 CARD8-AS1 SNAR-A9 AP2A1 CGB2 ALDH16A1 SNAR-A11 C19orf68 RPL18 RUVBL2 MIR5088 ATF5 DBP MIR4749 SNORD35A LOC101928295 SLC6A16 LHB SNAR-C5 PPFIA3 MIR6800 SNAR-C1 SNAR-A12 GRWD1 MED25 GRIN2D
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain PRR12 SCAF1 RRAS IRF3 CPT1C ADM5 BCL2L12 PRMT1 MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion PRRG2 TBC1D17 MIR4751 ADM5 IL4I1 PRMT1 PRR12 AKT1S1 FUZ PTOV1 MIR6799 AP2A1 BCL2L12 NOSIP PNKP MIR5088 TSKS ATF5 MIR4749 SCAF1 RRAS PTOV1-AS1 NUP62 IRF3 CPT1C PTOV1-AS2 MIR6800 MIR4750 MED25
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRR12 PRRG2 NOSIP SCAF1 RRAS IRF3 CPT1C ADM5 BCL2L12 PRMT1 MIR5088
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD33 PRRG2 RCN3 ADM5 PRMT1 PRR12 FUZ SNORD34 MIR6799 AP2A1 BCL2L12 SNORD35B NOSIP SNORD32A FCGRT RPL13A MIR5088 TSKS SNORD35A SCAF1 RRAS RPS11 PTOV1-AS1 MIR150 IRF3 CPT1C MIR6800 MED25
nsv828578 Chr.19:49560777 - 49680548 on Build GRCh38 Loss PRR12 PRRG2 NOSIP SCAF1 RRAS IRF3 BCL2L12 PRMT1
nsv579908 Chr.19:49645135 - 49663393 on Build GRCh38 Loss SCAF1 IRF3

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