Hs04033984_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48029901 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4	6	1310	NP_062829.1
	XM_017026992.1	8	1511	XP_016882481.1
	BU734136.1	1	536

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	LIG1 C19orf68 PLA2G4C-AS1 BSPH1 ELSPBP1 CABP5 PLA2G4C
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SNAR-A10 CD37 SNAR-A3 FUZ PTOV1-AS2 SNAR-A14 SNAR-C2 ATF5 BCL2L12 DHDH PLEKHA4 ALDH16A1 NUP62 FTL CGB3 GYS1 LMTK3 PRMT1 SNAR-A5 RCN3 ZNF473 RPL18 MIR5088 CA11 SNAR-A13 MIR4749 SNAR-A7 ELSPBP1 HRC FUT1 SLC17A7 SEC1P KDELR1 PRRG2 CABP5 SNAR-C1 KCNA7 SNAR-G2 FUT2 ADM5 MIR6800 GRWD1 PLA2G4C-AS1 C19orf73 FLT3LG FAM83E RUVBL2 LOC105372430 PPFIA3 ZNF114 MED25 HSD17B14 SNAR-A1 CCDC155 CGB7 C19orf68 NTN5 SNAR-B1 SNAR-G1 LHB TSKS SULT2B1 NUCB1-AS1 TBC1D17 CGB5 SNORD33 SNORD34 AP2A1 SNAR-A4 LIG1 SNAR-A8 SNORD32A VRK3 SNAR-C5 SNAR-A9 SNRNP70 GRIN2D MAMSTR RASIP1 NOSIP MIR4324 CGB8 FGF21 FLJ26850 CARD8-AS1 RPS11 LOC101059948 GFY DKKL1 SNAR-A2 LOC101928295 SNAR-A11 SNAR-C3 SNAR-C4 SNAR-D SIGLEC16 SLC6A16 RRAS PTH2 TRPM4 SYNGR4 CGB2 CARD8 KCNJ14 IZUMO1 FCGRT PLA2G4C BAX MIR150 TEAD2 SNAR-B2 CYTH2 PPP1R15A SPACA4 BCAT2 DBP MIR4750 MIR4751 SPHK2 LOC105447645 PTOV1-AS1 TULP2 BSPH1 SNORD35B IL4I1 LIN7B IRF3 CCDC114 PRR12 SNORD35A MIR6799 CPT1C SCAF1 EMP3 SIGLEC11 TMEM143 SNAR-A12 PTOV1 PIH1D1 AKT1S1 NUCB1 CGB1 MIR6798 LOC100287477 SNAR-A6 NTF4 RPL13A PNKP
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	KDELR1 CCDC114 GRIN2D C19orf68 CABP5 SYNGR4 EMP3 CARD8 CARD8-AS1 TMEM143 LIG1 PLA2G4C-AS1 ELSPBP1 PLA2G4C ZNF114
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	SNAR-A1 SNAR-A3 CABP5 TPRX1 SNAR-C1 SNAR-C2 SNAR-A13 LINC01595 SNAR-A12 BSPH1 ELSPBP1 SNAR-C5 SULT2A1 SNAR-A2 CRX SNAR-C3 SNAR-C4
nsv579900	Chr.19:48019612 - 48033524 on Build GRCh38	Loss	ELSPBP1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 ELSPBP1 CABP5 PLA2G4C
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	SNAR-A1 SNAR-A3 CABP5 TPRX1 SNAR-C1 SNAR-C2 SNAR-A13 LINC01595 SNAR-A12 PLA2G4C-AS1 BSPH1 ELSPBP1 SNAR-C5 SULT2A1 SNAR-A2 CRX PLA2G4C SNAR-C3 SNAR-C4

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding