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See other SLC2A4RG CNV Assays ›
Gene Symbol
SLC2A4RG
Assay Reference Genome
Location

Chr.20:63741155 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04059124_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56731

Gene Name:

 SLC2A4 regulator

Gene Aliases:

 GEF, HDBP-1, HDBP1, Si-1-2, Si-1-2-19

Location:

 Chr.20:63739858-63744050 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC2A4RG NM_020062.3 NP_064446.2
AB044777.1 BAE71373.1
AB044786.1 BAD29732.1
AB052777.1 BAD29733.1
AF249267.3 AAF97516.2
AK298304.1 1 45
BC001402.2 AAH01402.2
BC052306.1 AAH52306.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion ZGPAT SLC2A4RG ZBTB46 LIME1
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion TNFRSF6B ARFRP1 ZGPAT STMN3 SLC2A4RG RTEL1 RTEL1-TNFRSF6B ZBTB46-AS1 ZBTB46 LIME1
nsv586615 Chr.20:63734204 - 63741603 on Build GRCh38 Gain ZGPAT SLC2A4RG LIME1
dgv523n27 Chr.20:63738644 - 63789659 on Build GRCh38 Loss SLC2A4RG ZBTB46 LIME1
nsv586644 Chr.20:63738872 - 63741460 on Build GRCh38 Gain SLC2A4RG LIME1
nsv586614 Chr.20:63725275 - 63741460 on Build GRCh38 Gain ZGPAT SLC2A4RG LIME1
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion TNFRSF6B ARFRP1 ZGPAT STMN3 SLC2A4RG RTEL1 RTEL1-TNFRSF6B ZBTB46 LIME1
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss ZGPAT SLC2A4RG ZBTB46 LIME1
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MYT1 MIR941-5 DNAJC5 NPBWR2 ABHD16B MIR647 MIR941-1 UCKL1-AS1 ZBTB46 MIR941-3 TPD52L2 ZNF512B STMN3 RTEL1 GMEB2 LKAAEAR1 OPRL1 C20orf181 SAMD10 LINC00176 PCMTD2 LINC00266-1 TNFRSF6B ZGPAT SLC2A4RG RTEL1-TNFRSF6B LOC100505771 MIR6813 RGS19 MIR941-2 SOX18 MIR1914 ARFRP1 UCKL1 ZBTB46-AS1 PRPF6 MIR941-4 TCEA2 LIME1
nsv1059142 Chr.20:63731978 - 63798885 on Build GRCh38 Gain ZGPAT SLC2A4RG ZBTB46 LIME1
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss TNFRSF6B ZGPAT SLC2A4RG RTEL1-TNFRSF6B PPDPF LOC100505771 PTK6 ZBTB46 HELZ2 ARFRP1 STMN3 RTEL1 GMEB2 FNDC11 SRMS EEF1A2 LIME1
nsv586633 Chr.20:63737667 - 63741460 on Build GRCh38 Loss SLC2A4RG LIME1
dgv7680n54 Chr.20:63737451 - 63743088 on Build GRCh38 Gain SLC2A4RG LIME1
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss TNFRSF6B ZGPAT SLC2A4RG RTEL1-TNFRSF6B PPDPF LOC100505771 PTK6 ZBTB46 HELZ2 ARFRP1 STMN3 RTEL1 GMEB2 FNDC11 KCNQ2 SRMS EEF1A2 LIME1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Function(s) Process(es)


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