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See other PDE9A CNV Assays ›
Gene Symbol
PDE9A
Assay Reference Genome
Location

Chr.21:42661791 on build GRCh38
Cytoband
21q22.3
Assay ID Hs04069701_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5152

Gene Name:

 phosphodiesterase 9A

Gene Aliases:

 HSPDE9A2

Location:

 Chr.21:42653752-42775509 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PDE9A NM_001001567.1 NP_001001567.1
NM_001001568.1 NP_001001568.1
NM_001001569.1 NP_001001569.1
NM_001001570.1 NP_001001570.1
NM_001001571.1 NP_001001571.1
NM_001001572.1 NP_001001572.1
NM_001001573.1 NP_001001573.1
NM_001001574.1 NP_001001574.1
NM_001001575.1 NP_001001575.1
NM_001001576.1 NP_001001576.1
NM_001001577.1 NP_001001577.1
NM_001001578.1 NP_001001578.1
NM_001001579.1 NP_001001579.1
NM_001001580.1 NP_001001580.1
NM_001001581.1 NP_001001581.1
NM_001001582.1 NP_001001582.1
NM_001001583.1 NP_001001583.1
NM_001001584.2 NP_001001584.1
NM_001001585.1 NP_001001585.1
NM_001315533.1 NP_001302462.1
NM_002606.2 NP_002597.1
XM_011529600.2 XP_011527902.1
XM_017028366.1 XP_016883855.1
XM_017028367.1 XP_016883856.1
AF048837.1 AAC39778.1
AF067223.1 AAC26723.1
AF067224.1 AAC26724.1
AF067225.1 AAC26725.1
AF067226.1 AAC26726.1
AI492065.1
AK001307.1
AK294112.1
AK314679.1
AY196299.1 AAO34685.1
AY196300.1 AAO34686.1
AY196301.1 AAO34687.1
AY196302.1 AAO34688.1
AY196303.1 AAO34689.1
AY196304.1 AAO34690.1
AY196305.1 AAO34691.1
AY196306.1 AAO34692.1
AY196307.1 AAO34693.1
AY196308.1 AAO34694.1
AY196309.1 AAO34695.1
AY196310.1 AAO34696.1
AY196311.1 AAO34697.1
AY196312.1 AAO34698.1
AY196313.1 AAO34699.1
AY196314.1 AAO34700.1
AY242121.1 AAO88210.1
AY701187.1 AAV84271.1
BC009047.1 AAH09047.1
BT007016.1 AAP35662.1
KU178246.1
KU178247.1
KU178248.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv3534 Chr.21:42650074 - 42681450 on Build GRCh38 Insertion LOC101928255 PDE9A
nsv522001 Chr.21:42421796 - 42827928 on Build GRCh38 Gain LOC101928212 LOC101928255 LOC101928284 UBASH3A PDE9A RSPH1 LOC101930094 LOC101928233 SLC37A1 LOC101928311
nsv587654 Chr.21:42631745 - 42665548 on Build GRCh38 Loss LOC101928255 PDE9A
esv2666871 Chr.21:42615442 - 43467915 on Build GRCh38 Deletion LOC101928255 LINC00313 LINC00319 CRYAA LOC101928284 LOC400870 TCONS_00029157 ERVH48-1 PDE9A SIK1 PKNOX1 CBS U2AF1 LINC00322 HSF2BP WDR4 NDUFV3 MIR5692B FRGCA LOC101928311
nsv953634 Chr.21:42648991 - 42669590 on Build GRCh38 Deletion LOC101928255 PDE9A
esv3647086 Chr.21:42641558 - 42685014 on Build GRCh38 Gain LOC101928255 PDE9A

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More Information


Additional Information:

For this assay, SNP(s) [rs73905723] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

phosphodiesterase

Gene Ontology Categories:

Function(s) Process(es)


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