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See other RANGAP1 CNV Assays ›
Gene Symbol
RANGAP1
Assay Reference Genome
Location

Chr.22:41246948 on build GRCh38
Cytoband
22q13.2
Assay ID Hs04078117_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5905

Gene Name:

 Ran GTPase activating protein 1

Gene Aliases:

 Fug1, RANGAP, SD

Location:

 Chr.22:41244777-41302213 on Build GRCh38

Assay Gene Location:

 Within Intron 22
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RANGAP1 NM_001278651.1 NP_001265580.1
NM_001317930.1 NP_001304859.1
NM_002883.3 NP_002874.1
XM_005261695.1 XP_005261752.1
XM_005261696.1 XP_005261753.1
XM_006724289.3 XP_006724352.1
XM_011530293.1 XP_011528595.1
XM_011530294.2 XP_011528596.1
XM_011530295.2 XP_011528597.1
XM_017028893.1 XP_016884382.1
XM_017028894.1 XP_016884383.1
XM_017028895.1 XP_016884384.1
XM_017028896.1 XP_016884385.1
XM_017028897.1 XP_016884386.1
XM_017028898.1 XP_016884387.1
XM_017028899.1 XP_016884388.1
AB058738.1
AK302222.1
AK303524.1
BC004990.1 AAH04990.1
BC014044.2 AAH14044.1
BC019676.1 AAH19676.1
BC041396.2 AAH41396.1
CR456557.1 CAG30443.1
X82260.1 CAA57714.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv589050 Chr.22:41231539 - 41454496 on Build GRCh38 Gain TEF LOC100996598 RANGAP1 ZC3H7B TOB2 CHADL MIR6889
nsv817997 Chr.22:41244293 - 41366866 on Build GRCh38 Gain RANGAP1 ZC3H7B MIR6889
nsv524585 Chr.22:40993505 - 41794305 on Build GRCh38 Loss TEF SNU13 LOC100996598 RANGAP1 EP300 ZC3H7B MIR1281 L3MBTL2 LOC105373044 MEI1 TOB2 MIR6889 PMM1 CSDC2 PHF5A SNORD140 ACO2 DESI1 EP300-AS1 XRCC6 POLR3H C22orf46 CHADL
nsv589049 Chr.22:41168704 - 41276267 on Build GRCh38 Gain RANGAP1 EP300-AS1 EP300 L3MBTL2 CHADL MIR6889

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More Information


Additional Information:

For this assay, SNP(s) [rs73430506] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

GTPase-activating protein

Gene Ontology Categories:

Function(s) Process(es)


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