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See other LOC102724378 CNV Assays ›
Gene Symbol
LOC102724378
Assay Reference Genome
Location

Chr.22:37744505 on build GRCh38
Cytoband
22q13.1
Assay ID Hs04092794_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 102724378

Gene Name:

 uncharacterized LOC102724378

Gene Aliases:

 -

Location:

 Chr.22:37738726-37747457 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC102724378 XM_011530647.2 XP_011528949.1
XM_017029173.1 XP_016884662.1

Target Gene Details

Entrez Gene ID:

 11078

Gene Name:

 TRIO and F-actin binding protein

Gene Aliases:

 DFNB28, HRIHFB2122, TAP68, TARA, dJ37E16.4

Location:

 Chr.22:37696988-37776556 on Build GRCh38

Assay Gene Location:

 Within Intron 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRIOBP NM_001039141.2 NP_001034230.1
AK096634.2
DQ228003.1 ABB59559.1
DQ228005.1 ABB59561.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv829203 Chr.22:36998126 - 37773322 on Build GRCh38 Loss MFNG SH3BP1 LGALS2 IL2RB CDC42EP1 C1QTNF6 SSTR3 NOL12 CYTH4 LGALS1 TST LOC101927051 ELFN2 TRIOBP RAC2 LOC102724378 LOC100506271 KCTD17 PDXP CARD10 TEX33 TMPRSS6 GGA1 MPST
esv2758838 Chr.22:37607870 - 37869871 on Build GRCh38 Loss MIR659 GALR3 SH3BP1 NOL12 LGALS1 MIR658 ANKRD54 LOC101927051 GCAT EIF3L TRIOBP LOC102724378 PDXP H1F0 GGA1
esv3575478 Chr.22:37722215 - 37791928 on Build GRCh38 Gain TRIOBP LOC102724378
nsv471197 Chr.22:37600773 - 37762734 on Build GRCh38 Loss SH3BP1 LOC101927051 TRIOBP LOC102724378 PDXP GGA1 NOL12 LGALS1

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More Information


Additional Information:

For this assay, SNP(s) [rs73411507] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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