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See other CHD1L CNV Assays ›
Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147189542 on build GRCh38
Cytoband
1q21.1
Assay ID Hs04208492_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain PDIA3P1 NBPF13P PPIAL4G LOC100996763 NBPF11 LOC101928979 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 RNVU1-6 LOC100996517 FMO5 HYDIN2 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 NUDT4P1 BCL9 CHD1L PDE4DIP LOC105371242 NBPF10 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NBPF13P PPIAL4G LOC100996763 LIX1L LOC101928979 NOTCH2NL CH17-408M7.1 GPR89A POLR3C RNVU1-6 LOC100996517 FMO5 LOC728989 LOC100505824 PDZK1P1 LOC101927468 ANKRD34A NUDT4P1 RNF115 BCL9 NUDT17 PEX11B POLR3GL NBPF10 GJA8 MIR5087 LINC00624 HFE2 RBM8A CD160 RNVU1-8 RNVU1-3 RNVU1-1 NBPF12 TXNIP PDIA3P1 PDZK1 NBPF11 ANKRD35 ACP6 PRKAB2 LOC100132057 HYDIN2 GJA5 CHD1L PDE4DIP LOC105371242 RNU1-13P ITGA10 LINC01138 NUDT4P2 PIAS3 MIR6077 LOC284561 MIR6736 RNVU1-7 GNRHR2 GPR89B LOC105371226 NBPF14
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion FMO5 CHD1L
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 LOC728989 PDIA3P1 RNVU1-8 NBPF13P CHD1L PRKAB2
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss PDIA3P1 NBPF13P PPIAL4G LOC100996763 NBPF11 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 LOC100996517 FMO5 HYDIN2 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 NUDT4P1 BCL9 CHD1L PDE4DIP LOC105371242 NBPF10 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion TXNIP PDIA3P1 NBPF13P PPIAL4G LOC100996763 LIX1L NBPF11 LOC101928979 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 RNVU1-6 LOC100996517 FMO5 HYDIN2 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 ANKRD34A NUDT4P1 BCL9 CHD1L POLR3GL PDE4DIP LOC105371242 NBPF10 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 HFE2 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication PDIA3P1 NBPF13P PPIAL4G LOC100996763 NBPF11 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 LOC100996517 FMO5 HYDIN2 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 NUDT4P1 BCL9 CHD1L PDE4DIP LOC105371242 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain PDIA3P1 NBPF13P PPIAL4G LOC100996763 NBPF11 LOC101928979 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 RNVU1-6 LOC100996517 FMO5 HYDIN2 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 NUDT4P1 BCL9 CHD1L PDE4DIP LOC105371242 NBPF10 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion PDIA3P1 NBPF13P PPIAL4G LOC100996763 NBPF11 LOC101928979 NOTCH2NL ACP6 PRKAB2 CH17-408M7.1 LOC100132057 LOC100996517 FMO5 HYDIN2 NBPF9 LOC728989 LOC100505824 PDZK1P1 GJA5 LOC101927468 NUDT4P1 BCL9 CHD1L PDE4DIP LOC105371242 NBPF10 RNU1-13P GJA8 MIR5087 LINC01138 NUDT4P2 LINC00624 MIR6077 LOC284561 RNVU1-7 RNVU1-8 RNVU1-3 RNVU1-1 GPR89B LOC105371226 NBPF14 NBPF12
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss FMO5 CHD1L
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 PDIA3P1 CHD1L PRKAB2

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