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See other CRAMP1 CNV Assays ›
Gene Symbol
CRAMP1
Assay Reference Genome
Location

Chr.16:1616581 on build GRCh38
Cytoband
16p13.3
Assay ID Hs04455770_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 57585

Gene Name:

 cramped chromatin regulator homolog 1

Gene Aliases:

 CRAMP1L, HN1L, TCE4

Location:

 Chr.16:1614640-1677908 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CRAMP1 NM_020825.3 NP_065876.3
BE048705.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3637620 Chr.16:1616557 - 1617485 on Build GRCh38 Loss CRAMP1
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss SPSB3 EME2 NME3 MIR3177 IFT140 MRPS34 MAPK8IP3 HN1L HAGH NUBP2 LOC105371046 IGFALS CRAMP1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NTN3 ARHGDIG CASKIN1 HBZ MAPK8IP3 METRN LINC00235 LINC00254 METTL26 TMEM8A MIR662 C16orf91 CAPN15 GFER LOC105371038 PDPK1 SSTR5 RPL3L ATP6V0C WFIKKN1 SNORD60 C1QTNF8 LOC100134368 CEMP1 TPSD1 TBC1D24 PRR35 CCNF SSTR5-AS1 MSLN MIR3178 PRSS29P NPW MRPL28 DNASE1L2 TPSAB1 PGP PRSS27 LOC729652 SYNGR3 EME2 RAB26 PKD1 TPSB2 POLR3K SNORA10 NARFL SNHG19 HAGH HBA2 TPSG1 FBXL16 LOC107987233 TSC2 STUB1 PTX4 SNORA78 AMDHD2 ECI1 CCDC154 WDR24 MIR4717 DECR2 MIR1225 TRAF7 IGFALS FLJ42627 SLC9A3R2 CRAMP1 NHLRC4 LOC105371049 HAGHL PRR25 ERVK13-1 TSR3 SOX8 RPS2 TELO2 MIR940 LOC105371045 SNRNP25 CHTF18 LOC652276 TMEM204 LOC105371184 MIR3677 FAM234A LUC7L LOC100287175 MIR6767 FAM173A NME3 NOXO1 GNG13 DDX11L10 RPL23AP5 HN1L MPG NPRL3 PDIA2 RHBDF1 CACNA1H NTHL1 LMF1-AS1 MIR3180-5 LMF1 JMJD8 HBA1 MIR4516 SNHG9 BRICD5 TBL3 NME4 BAIAP3 PIGQ HBM MSRB1 SPSB3 MIR3177 LOC105371047 IFT140 KCTD5 RPUSD1 SNORA64 RNF151 GNPTG RHBDL1 NUBP2 RNPS1 FAHD1 CLCN7 HS3ST6 UNKL UBE2I WDR90 ZNF598 RGS11 C16orf59 LOC106660606 RAB40C MRPS34 RAB11FIP3 MCRIP2 HBQ1 MEIOB E4F1 ABCA3 LOC101929280 MIR3176 ABCA17P LOC105371046 MIR6768 CCDC78 LOC107984876 WASIR2 RHOT2 MIR6859-4 MIR5587 AXIN1 MIR6511B1 NDUFB10 MLST8
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss SPSB3 EME2 NME3 MIR3177 LOC105371047 IFT140 TELO2 MRPS34 MAPK8IP3 HN1L MEIOB HAGH NUBP2 LOC105371046 FAHD1 TMEM204 IGFALS CRAMP1
dgv4855n54 Chr.16:1577507 - 1694025 on Build GRCh38 Loss LOC105371046 IFT140 CRAMP1 HN1L
nsv428317 Chr.16:1550716 - 1711581 on Build GRCh38 Gain LOC105371046 TMEM204 IFT140 CRAMP1 MAPK8IP3 HN1L
nsv827496 Chr.16:1589777 - 1638333 on Build GRCh38 Gain LOC105371046 IFT140 CRAMP1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

DNA metabolism protein

Gene Ontology Categories:

Process(es)


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