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See other ZGPAT CNV Assays ›
Gene Symbol
ZGPAT
Assay Reference Genome
Location

Chr.20:63722990 on build GRCh38
Cytoband
20q13.33
Assay ID Hs04495007_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 84619

Gene Name:

 zinc finger CCCH-type and G-patch domain containing

Gene Aliases:

 GPATC6, GPATCH6, KIAA1847, ZC3H9, ZC3HDC9, ZIP

Location:

 Chr.20:63707442-63736142 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ZGPAT NM_001083113.1 NP_001076582.1
NM_001195653.1 NP_001182582.1
NM_001195654.1 NP_001182583.1
NM_032527.4 NP_115916.3
NM_181485.2 NP_852150.2
AB058750.3
AK027878.1 BAB55426.1
AK074961.1 BAC11317.1
AK307368.1
AK314726.1
BC019338.1 AAH19338.1
BC032612.1 AAH32612.1
CV027894.1
KU178806.1
KU178807.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2722959 Chr.20:63715664 - 63806918 on Build GRCh38 Deletion ZGPAT LIME1 SLC2A4RG ZBTB46
esv2722960 Chr.20:63722996 - 63723932 on Build GRCh38 Deletion ZGPAT
nsv953308 Chr.20:63650148 - 63831847 on Build GRCh38 Deletion ZGPAT LIME1 ZBTB46-AS1 ARFRP1 RTEL1-TNFRSF6B RTEL1 TNFRSF6B STMN3 SLC2A4RG ZBTB46
nsv1160690 Chr.20:63639552 - 63744287 on Build GRCh38 Deletion ZGPAT LIME1 ARFRP1 RTEL1-TNFRSF6B RTEL1 TNFRSF6B STMN3 SLC2A4RG ZBTB46
esv7227 Chr.20:63715550 - 63807161 on Build GRCh38 Loss ZGPAT LIME1 SLC2A4RG ZBTB46
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss MIR647 SAMD10 MIR941-1 MIR941-5 ZBTB46-AS1 RTEL1 STMN3 PRPF6 ABHD16B RGS19 DNAJC5 MIR941-2 MYT1 ZNF512B LIME1 TPD52L2 MIR941-3 LOC100505771 NPBWR2 MIR6813 TNFRSF6B PCMTD2 C20orf181 GMEB2 MIR1914 LINC00266-1 ARFRP1 RTEL1-TNFRSF6B LINC00176 MIR941-4 UCKL1 ZBTB46 LKAAEAR1 ZGPAT OPRL1 SLC2A4RG UCKL1-AS1 SOX18 TCEA2
nsv828801 Chr.20:63706624 - 63731055 on Build GRCh38 Loss ZGPAT ARFRP1
nsv470563 Chr.20:63486715 - 63793308 on Build GRCh38 Loss GMEB2 ARFRP1 EEF1A2 PTK6 RTEL1-TNFRSF6B RTEL1 STMN3 PPDPF ZBTB46 SRMS ZGPAT LIME1 LOC100505771 TNFRSF6B SLC2A4RG FNDC11 HELZ2
esv2758806 Chr.20:63470996 - 63745014 on Build GRCh38 Gain+Loss GMEB2 KCNQ2 ARFRP1 EEF1A2 PTK6 RTEL1-TNFRSF6B RTEL1 STMN3 PPDPF ZBTB46 SRMS ZGPAT LIME1 LOC100505771 TNFRSF6B SLC2A4RG FNDC11 HELZ2

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