Genomic Map
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Target Gene Details
Entrez Gene ID: | 3987 |
Gene Name: | LIM zinc finger domain containing 1 |
Gene Aliases: |
PINCH, PINCH-1, PINCH1 |
Location: |
Chr.2:108534355-108687246 on Build GRCh38 |
Assay Gene Location: | Within Intron 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| LIMS1 | NM_001193483.2 | NP_001180412.1 | ||
| XM_005263949.1 | XP_005264006.1 | |||
| XM_017004092.1 | XP_016859581.1 | |||
| AF527761.1 | ||||
| AK296992.1 | ||||
| AK314217.1 | ||||
| DC401794.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2759081 | Chr.2:107833421 - 108606881 on Build GRCh38 | Gain |
 GCC2
SULT1C3
SULT1C4
LINC01594
LINC01593
SLC5A7
SULT1C2
GCC2-AS1
LIMS1
SULT1C2P1
RGPD4
|
| nsv834328 | Chr.2:108422875 - 108613866 on Build GRCh38 | Gain |
GCC2
GCC2-AS1
LIMS1
|
| esv2720498 | Chr.2:107831020 - 108722824 on Build GRCh38 | Deletion |
GCC2
SULT1C3
SULT1C4
RANBP2
LINC01594
LINC01593
SLC5A7
SULT1C2
GCC2-AS1
LIMS1
SULT1C2P1
RGPD4
|
| nsv527491 | Chr.2:107924531 - 108650418 on Build GRCh38 | Loss |
GCC2
SULT1C3
SULT1C4
LINC01594
LINC01593
SLC5A7
SULT1C2
GCC2-AS1
LIMS1
SULT1C2P1
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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