Hs04749505_cn

• Gene Symbol: CXCR6
• Assay Reference Genome Location: Chr.3:45943194 on build GRCh38
• Cytoband: 3p21.31

Target Gene Details

• Entrez Gene ID: 10663
• Gene Name: C-X-C motif chemokine receptor 6
• Gene Aliases: BONZO, CD186, STRL33, TYMSTR
• Location: Chr.3:45940688-45948354 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CXCR6	XM_011533290.2			XP_011531592.1
	XM_011533291.2			XP_011531593.1

Target Gene Details

• Entrez Gene ID: 79443
• Gene Name: FYVE and coiled-coil domain containing 1
• Gene Aliases: CATC2, CTRCT18, RUFY3, ZFYVE7
• Location: Chr.3:45917899-45995824 on Build GRCh38
• Assay Gene Location: Within Intron 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FYCO1	NM_024513.3			NP_078789.2
	XM_006713333.3			XP_006713396.1
	XM_006713334.3			XP_006713397.1
	XM_011534111.2			XP_011532413.1
	AJ292348.2			CAC33883.1
	AK023397.1			BAB14559.1
	AK074165.1			BAB84991.1
	AL832358.1			CAD91151.1
	AL833308.2			CAD89924.1
	BC007218.1			AAH07218.1
	BC101468.1			AAI01469.1
	BC101470.1			AAI01471.1
	BC143368.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834678	Chr.3:45762802 - 45968764 on Build GRCh38	Gain	FYCO1 CCR9 SLC6A20 LZTFL1 CXCR6

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

chemotaxis
inflammatory response
G-protein coupled receptor signaling pathway
viral genome replication
chemokine-mediated signaling pathway
plus-end-directed vesicle transport along microtubule

Function(s)

G-protein coupled receptor activity
coreceptor activity
C-X-C chemokine receptor activity
C-X-C chemokine binding
protein binding
metal ion binding