Hs04945969_cn

• Gene Symbol: LOC105375131
• Assay Reference Genome Location: Chr.7:4132037 on build GRCh38
• Cytoband: 7p22.2

Target Gene Details

• Entrez Gene ID: 105375131
• Gene Name: basic proline-rich protein-like
• Gene Aliases: -
• Location: Chr.7:4126653-4137206 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105375131	XM_011515667.2			XP_011513969.1

Target Gene Details

• Entrez Gene ID: 221935
• Gene Name: sidekick cell adhesion molecule 1
• Gene Aliases: -
• Location: Chr.7:3301448-4269000 on Build GRCh38
• Assay Gene Location: Within Intron 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SDK1	NM_001079653.1			NP_001073121.1
	NM_152744.3			NP_689957.3
	XM_011515188.1			XP_011513490.1
	XM_011515189.1			XP_011513491.1
	XM_011515190.1			XP_011513492.1
	XM_017011837.1			XP_016867326.1
	XM_017011838.1			XP_016867327.1
	XM_017011839.1			XP_016867328.1
	XM_017011840.1			XP_016867329.1
	AK074083.1			BAB84909.1
	AL833354.1
	AY310398.1			AAP75619.1
	DB065853.1
	DB454012.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1019305	Chr.7:3952014 - 4236372 on Build GRCh38	Gain	SDK1 LOC105375131
nsv1018462	Chr.7:4058044 - 4133981 on Build GRCh38	Loss	SDK1 LOC105375131
nsv518299	Chr.7:4077033 - 4246965 on Build GRCh38	Loss	SDK1 LOC105375131
esv2764033	Chr.7:4081946 - 4132259 on Build GRCh38	Gain	SDK1 LOC105375131
esv3611906	Chr.7:4042548 - 4170582 on Build GRCh38	Gain	SDK1 LOC105375131
nsv950795	Chr.7:4127069 - 4179668 on Build GRCh38	Deletion	SDK1 LOC105375131
nsv605939	Chr.7:3915884 - 4573976 on Build GRCh38	Gain	SDK1 LOC105375131
nsv527624	Chr.7:3987904 - 4384423 on Build GRCh38	Gain	SDK1 LOC105375131

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

homophilic cell adhesion via plasma membrane adhesion molecules
synapse assembly
retina layer formation
behavioral response to cocaine
regulation of dendritic spine development

Function(s)

identical protein binding