Hs04963390_cn

• Gene Symbol: CALN1
• Assay Reference Genome Location: Chr.7:71793357 on build GRCh38
• Cytoband: 7q11.22

Target Gene Details

• Entrez Gene ID: 83698
• Gene Name: calneuron 1
• Gene Aliases: CABP8
• Location: Chr.7:71779491-72504271 on Build GRCh38
• Assay Gene Location: Within Intron 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CALN1	NM_001017440.2			NP_001017440.1
	NM_031468.3			NP_113656.2
	XM_011516594.2			XP_011514896.1
	XM_011516595.1			XP_011514897.1
	XM_011516596.2			XP_011514898.1
	XM_011516597.2			XP_011514899.1
	XM_011516599.1			XP_011514901.1
	XM_017012675.1			XP_016868164.1
	XM_017012676.1			XP_016868165.1
	XM_017012677.1			XP_016868166.1
	XM_017012678.1			XP_016868167.1
	XM_017012679.1			XP_016868168.1
	XM_017012680.1			XP_016868169.1
	XM_017012681.1			XP_016868170.1
	XM_017012682.1			XP_016868171.1
	XM_017012683.1			XP_016868172.1
	AF282250.1			AAK15155.1
	AK123862.1
	AK313054.1
	AY007302.1			AAG09620.1
	AY726595.1
	BC020200.1			AAH20200.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516049	Chr.7:71561478 - 71815314 on Build GRCh38	Gain	CALN1 WBSCR17
nsv607459	Chr.7:71774529 - 71801548 on Build GRCh38	Gain	CALN1
esv3613640	Chr.7:71778998 - 71802508 on Build GRCh38	Gain	CALN1
nsv1033922	Chr.7:71750208 - 71802242 on Build GRCh38	Gain	CALN1
nsv1017575	Chr.7:70687626 - 71905471 on Build GRCh38	Gain	MIR3914-2 MIR3914-1 CALN1 WBSCR17 AUTS2
dgv6456n100	Chr.7:71568840 - 71823976 on Build GRCh38	Gain	CALN1 WBSCR17
nsv1026896	Chr.7:71538477 - 72256531 on Build GRCh38	Gain	CALN1 WBSCR17

More Information

Additional Information:

For this assay, SNP(s) [rs115708654] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

calcium ion binding