Genomic Map
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Target Gene Details
Entrez Gene ID: | 79039 |
Gene Name: | DEAD-box helicase 54 |
Gene Aliases: |
DP97 |
Location: |
Chr.12:113157173-113185479 on Build GRCh38 |
Assay Gene Location: | Within Intron 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| DDX54 | NM_001111322.1 | NP_001104792.1 | ||
| NM_024072.3 | NP_076977.3 | |||
| AF478457.1 | AAL85336.1 | |||
| AY148094.1 | AAN59978.1 | |||
| BC005848.2 | AAH05848.2 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv519540 | Chr.12:113042705 - 113459599 on Build GRCh38 | Gain+Loss |
 SLC8B1
DTX1
RASAL1
IQCD
MIR6762
MIR7106
SDS
DDX54
TPCN1
CFAP73
PLBD2
RITA1
SDSL
|
| esv996809 | Chr.12:113160789 - 113174565 on Build GRCh38 | Deletion |
DDX54
|
| esv3892265 | Chr.12:113099321 - 113527932 on Build GRCh38 | Gain |
SLC8B1
RASAL1
IQCD
MIR6762
MIR7106
LHX5
SDS
DDX54
TPCN1
CFAP73
LHX5-AS1
PLBD2
RITA1
SDSL
|
| esv3630792 | Chr.12:112988703 - 113838810 on Build GRCh38 | Gain |
SLC8B1
DTX1
RASAL1
OAS2
IQCD
LINC01234
RBM19
MIR6762
MIR7106
LHX5
SDS
DDX54
TPCN1
CFAP73
LHX5-AS1
PLBD2
RITA1
SDSL
|
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Additional Information:
For this assay, SNP(s) [rs117291153] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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