Hs05321670_cn

• Gene Symbol: SCAPER
• Assay Reference Genome Location: Chr.15:76380254 on build GRCh38
• Cytoband: 15q24.3

Target Gene Details

• Entrez Gene ID: 49855
• Gene Name: S-phase cyclin A associated protein in the ER
• Gene Aliases: MSTP063, ZNF291, Zfp291
• Location: Chr.15:76348185-76905455 on Build GRCh38
• Assay Gene Location: Within Intron 37

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCAPER	NM_001145923.1			NP_001139395.1
	NM_020843.2			NP_065894.2
	XM_005254417.2			XP_005254474.1
	XM_005254419.2			XP_005254476.1
	XM_011521650.1			XP_011519952.1
	XM_011521652.2			XP_011519954.1
	XM_011521653.2			XP_011519955.1
	XM_011521654.2			XP_011519956.1
	XM_011521656.2			XP_011519958.1
	XM_017022266.1			XP_016877755.1
	XM_017022267.1			XP_016877756.1
	XM_017022268.1			XP_016877757.1
	XM_017022269.1			XP_016877758.1
	XM_017022270.1			XP_016877759.1
	XM_017022271.1			XP_016877760.1
	XM_017022272.1			XP_016877761.1
	XM_017022273.1			XP_016877762.1
	XM_017022275.1			XP_016877764.1
	XM_017022276.1			XP_016877765.1
	XM_017022277.1			XP_016877766.1
	XM_017022278.1			XP_016877767.1
	AB040887.1	27	4893	BAA95978.1
	AF119814.1			AAG47945.1
	AF242528.1			AAK29205.1
	AK025663.1
	AL137612.1			CAB70841.1
	BC015212.1			AAH15212.1
	BT006762.1			AAP35408.1
	BX647285.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv510667	Chr.15:76361018 - 76415969 on Build GRCh38	Deletion	SCAPER
esv2749895	Chr.15:75415580 - 76472296 on Build GRCh38	Deletion	TMEM266 LOC101929439 SNUPN LOC107984799 SIN3A ETFA DNM1P35 TYRO3P ODF3L1 FBXO22 NRG4 UBE2Q2 SCAPER FBXO22-AS1 IMP3 MIR4313 PTPN9 CSPG4 ISL2 SNX33 LOC441728
esv2749898	Chr.15:75764003 - 77933523 on Build GRCh38	Deletion	LOC645752 TMEM266 LOC101929439 PSTPIP1 ETFA LINGO1-AS1 TYRO3P LINGO1 FBXO22 NRG4 UBE2Q2 SCAPER HMG20A LINGO1-AS2 MIR3713 FBXO22-AS1 RCN2 TSPAN3 ISL2 LOC101929457 LOC441728 LINC00597 PEAK1
nsv1160305	Chr.15:76358361 - 76545880 on Build GRCh38	Deletion	SCAPER

More Information

Additional Information:

For this assay, SNP(s) [rs78181637] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

nucleic acid binding
zinc ion binding