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See other APBA2 CNV Assays ›
Gene Symbol
APBA2
Assay Reference Genome
Location

Chr.15:28929703 on build GRCh38
Cytoband
15q13.1
Assay ID Hs05339556_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 321

Gene Name:

 amyloid beta precursor protein binding family A member 2

Gene Aliases:

 D15S1518E, HsT16821, LIN-10, MGC:14091, MINT2, X11-BETA, X11L

Location:

 Chr.15:28885479-29118315 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
APBA2 NM_001130414.1 NP_001123886.1
NM_005503.3 NP_005494.2
XM_011521488.2 XP_011519790.1
XM_011521489.2 XP_011519791.1
XM_011521490.2 XP_011519792.1
XM_011521493.2 XP_011519795.1
XM_011521494.2 XP_011519796.1
XM_017022101.1 XP_016877590.1
XM_017022102.1 XP_016877591.1
XM_017022103.1 XP_016877592.1
XM_017022104.1 XP_016877593.1
XM_017022105.1 XP_016877594.1
XM_017022106.1 XP_016877595.1
XM_017022107.1 XP_016877596.1
XM_017022108.1 XP_016877597.1
XM_017022109.1 XP_016877598.1
XM_017022110.1 XP_016877599.1
XM_017022113.1 XP_016877602.1
XM_017022114.1 XP_016877603.1
AF047348.1 AAC39767.1
AK310413.1
BC082986.1 AAH82986.1
BX332225.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss GOLGA8R GOLGA8M DKFZP434L187 PDCD6IPP2 NSMCE3 FAM189A1 GOLGA8T GOLGA6L7P LOC107984752 TJP1 ULK4P3 APBA2 WHAMMP2 LOC100130111 CHRFAM7A LOC100289656 GOLGA8J LOC105370746 LOC105370751 LOC101060569
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain PDCD6IPP2 APBA2 WHAMMP2 LOC100130111 NSMCE3 FAM189A1 LOC100289656 GOLGA6L7P LOC107984752 TJP1
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss GOLGA8R ULK4P2 GOLGA8T GOLGA8H GOLGA6L7P LOC107984752 TJP1 ULK4P3 APBA2 WHAMMP2 LOC100130111 CHRFAM7A LOC101060569 DKFZP434L187 PDCD6IPP2 NSMCE3 FAM189A1 LOC101927579 ARHGAP11B LOC100996413 LOC100289656 GOLGA8J LOC105370746 LOC100288637 LOC105370751
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain PDCD6IPP2 NSMCE3 FAM189A1 GOLGA8T GOLGA6L7P LOC107984752 TJP1 ULK4P3 APBA2 WHAMMP2 LOC100130111 LOC100289656 GOLGA8J
nsv516384 Chr.15:28920744 - 28996217 on Build GRCh38 Loss APBA2
nsv568662 Chr.15:27726493 - 29056123 on Build GRCh38 Gain GOLGA8F GOLGA8M HERC2P11 PDCD6IPP2 LOC101929047 OCA2 LOC100132202 LOC645202 HERC2 GOLGA6L7P GOLGA8G LOC107984752 HERC2P9 MIR4509-3 MIR4509-2 APBA2 WHAMMP2 LOC100289656

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More Information


Additional Information:

For this assay, SNP(s) [rs115433553] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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