Hs05375228_cn

• Gene Symbol: LIPC
• Assay Reference Genome Location: Chr.15:58454189 on build GRCh38
• Cytoband: 15q21.3

Target Gene Details

• Entrez Gene ID: 3990
• Gene Name: lipase C, hepatic type
• Gene Aliases: HDLCQ12, HL, HTGL, LIPH
• Location: Chr.15:58410754-58568952 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LIPC	NM_000236.2			NP_000227.2
	XM_005254372.1			XP_005254429.1
	AK290062.1
	AK292631.1
	AK293324.1
	AK309448.1
	AK315306.1
	BC132825.1
	BC136495.1
	BC146659.1
	D83548.1			BAA12014.1
	J03540.1			AAA59520.1
	J03895.1			AAA61165.1
	X07228.1			CAA30188.1

Target Gene Details

• Entrez Gene ID: 101928694
• Gene Name: LIPC antisense RNA 1
• Gene Aliases: -
• Location: Chr.15:58434901-58498735 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LIPC-AS1	NR_120338.1
	AK091917.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv569600	Chr.15:58439368 - 58486840 on Build GRCh38	Loss	LIPC LIPC-AS1
nsv569598	Chr.15:58260407 - 58560264 on Build GRCh38	Loss	LOC101928668 LOC101928635 LIPC LIPC-AS1
nsv1043362	Chr.15:58434138 - 58464372 on Build GRCh38	Loss	LIPC LIPC-AS1
esv3581729	Chr.15:58432325 - 58464372 on Build GRCh38	Loss	LIPC LIPC-AS1
nsv1047048	Chr.15:58409201 - 58492601 on Build GRCh38	Loss	LOC101928635 LIPC LIPC-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

lipase

Gene Ontology Categories:

Process(es)

response to hypoxia
liver development
fatty acid biosynthetic process
phosphatidylserine metabolic process
circadian rhythm
cholesterol metabolic process
response to carbohydrate
response to acetate
heparan sulfate proteoglycan biosynthetic process
triglyceride catabolic process
response to nutrient levels
response to magnesium ion
cellular response to hormone stimulus
chylomicron remodeling
very-low-density lipoprotein particle remodeling
intermediate-density lipoprotein particle remodeling
low-density lipoprotein particle remodeling
high-density lipoprotein particle remodeling
chylomicron remnant clearance
low-density lipoprotein particle clearance
phosphatidylcholine catabolic process
response to drug
cholesterol homeostasis
response to amino acid
response to peptide hormone
reverse cholesterol transport
lipid digestion
phosphatidylethanolamine metabolic process
phosphatidic acid metabolic process
glycerophospholipid catabolic process
response to copper ion
developmental growth
protein oligomerization
response to glucocorticoid
response to calcium ion
triglyceride homeostasis
response to fatty acid

Function(s)

phospholipase activity
lysophospholipase activity
triglyceride lipase activity
heparin binding
lipid binding
phosphatidylcholine 1-acylhydrolase activity
transferase activity, transferring acyl groups
low-density lipoprotein particle binding
apolipoprotein binding
heparan sulfate proteoglycan binding
acylglycerol lipase activity