Hs05409097_cn

• Gene Symbol: LPCAT2
• Assay Reference Genome Location: Chr.16:55537122 on build GRCh38
• Cytoband: 16q12.2

Target Gene Details

• Entrez Gene ID: 54947
• Gene Name: lysophosphatidylcholine acyltransferase 2
• Gene Aliases: AGPAT11, AYTL1, LysoPAFAT
• Location: Chr.16:55509001-55586670 on Build GRCh38
• Assay Gene Location: Within Intron 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LPCAT2	NM_017839.4			NP_060309.2
	XM_005256006.2			XP_005256063.1
	XM_011523169.2			XP_011521471.1
	XM_017023376.1			XP_016878865.1
	AB244718.1
	AK000488.1			BAA91199.1
	AK308386.1
	BC002472.2			AAH02472.2
	BX641069.1			CAE46034.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv521337	Chr.16:55510637 - 55585662 on Build GRCh38	Loss	CAPNS2 LPCAT2
nsv1062908	Chr.16:55514410 - 55569276 on Build GRCh38	Loss	CAPNS2 LPCAT2
dgv2982n100	Chr.16:55507884 - 55555666 on Build GRCh38	Loss	LPCAT2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Process(es)

platelet activating factor biosynthetic process
phosphatidylcholine acyl-chain remodeling
membrane organization

Function(s)

1-acylglycerol-3-phosphate O-acyltransferase activity
calcium ion binding
2-acylglycerol-3-phosphate O-acyltransferase activity
1-acylglycerophosphocholine O-acyltransferase activity
1-alkylglycerophosphocholine O-acetyltransferase activity