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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89650120 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05432063_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BT006841.1 AAP35487.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss CDK10 GAS8 SPIRE2 TUBB3 AFG3L1P DEF8 ZNF276 CHMP1A FANCA DPEP1 SPATA33 VPS9D1-AS1 CENPBD1 MC1R LOC107984817 LOC105371419 TCF25 SPATA2L GAS8-AS1 VPS9D1 DBNDD1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss CDK10 SPIRE2 TUBB3 LOC101927817 ANKRD11 ZNF276 CHMP1A FANCA DPEP1 SPG7 VPS9D1-AS1 LOC100287036 CENPBD1 MC1R LOC107984817 LOC105371419 TCF25 SPATA2L URAHP TUBB8P7 DBNDD1 PRDM7 ZNF778 GAS8 LOC105371414 AFG3L1P SNORD68 DEF8 SPATA33 CPNE7 FAM157C GAS8-AS1 VPS9D1 RPL13
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain CDK10 DPEP1 SPATA33 SPATA2L CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain DPEP1 SPATA33 SPG7 CPNE7 LOC101927817 SNORD68 ANKRD11 RPL13 CHMP1A
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss SPIRE2 TRAPPC2L TUBB3 CDH15 APRT ZNF276 CHMP1A DPEP1 PABPN1L SPG7 VPS9D1-AS1 MC1R LOC107984817 TCF25 ACSF3 SLC22A31 LOC100129697 ZNF778 CYBA PIEZO1 AFG3L1P RNF166 MIR4722 CTU2 FAM157C LOC339059 GAS8-AS1 LOC105371409 CBFA2T3 RPL13 CDK10 SNAI3-AS1 LOC400558 LOC101927817 LOC101927793 SNAI3 ANKRD11 FANCA LOC100287036 CENPBD1 LOC105371419 SPATA2L URAHP TUBB8P7 DBNDD1 PRDM7 GAS8 LOC105371414 MVD SNORD68 DEF8 LINC00304 SPATA33 CPNE7 LOC107987238 IL17C VPS9D1 CDT1 LOC100289580 GALNS
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion CDK10 SNORD68 ZNF276 CHMP1A FANCA DPEP1 SPATA33 SPG7 VPS9D1-AS1 CPNE7 SPATA2L VPS9D1 RPL13
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain DPEP1 SPATA33 SPG7 CPNE7 SNORD68 RPL13 CHMP1A

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