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See other SH2B1 CNV Assays ›
Gene Symbol
SH2B1
Assay Reference Genome
Location

Chr.16:28849044 on build GRCh38
Cytoband
16p11.2
Assay ID Hs05438855_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 25970

Gene Name:

 SH2B adaptor protein 1

Gene Aliases:

 PSM, SH2B

Location:

 Chr.16:28846600-28874213 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SH2B1 NM_001308293.1 NP_001295222.1
XM_017023115.1 XP_016878604.1
AK055104.1
DA338190.1

Target Gene Details

Entrez Gene ID:

 7284

Gene Name:

 Tu translation elongation factor, mitochondrial

Gene Aliases:

 COXPD4, EF-TuMT, EFTU, P43

Location:

 Chr.16:28842411-28859562 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TUFM XM_017023619.1 XP_016879108.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4987n54 Chr.16:28824884 - 29032129 on Build GRCh38 Gain SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
esv3638348 Chr.16:28841706 - 28861977 on Build GRCh38 Gain SH2B1 TUFM MIR4721
esv3892826 Chr.16:28814728 - 29032129 on Build GRCh38 Gain+Loss SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
esv2758640 Chr.16:28163817 - 29139232 on Build GRCh38 Gain+Loss IL27 SH2B1 SULT1A2 ATP2A1-AS1 NPIP RRN3P2 CLN3 NFATC2IP XPO6 NPIPB6 RABEP2 EIF3CL TUFM CD19 APOBR MIR4721 MIR4517 ATP2A1 SGF29 MIR6862-2 SPNS1 ATXN2L NUPR1 SBK1 LOC101928215 SULT1A1 NPIPB9 MIR6862-1 NPIPB8 LAT EIF3C
nsv518648 Chr.16:28826194 - 29032129 on Build GRCh38 Loss SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
dgv502e214 Chr.16:28841240 - 28861977 on Build GRCh38 Loss SH2B1 TUFM MIR4721
nsv1059555 Chr.16:28373144 - 29195838 on Build GRCh38 Gain IL27 SH2B1 SULT1A2 ATP2A1-AS1 NPIP RRN3P2 CLN3 NFATC2IP RABEP2 EIF3CL TUFM CD19 APOBR MIR4721 MIR4517 ATP2A1 SGF29 MIR6862-2 SPNS1 ATXN2L NUPR1 LOC107984832 LOC101928215 SULT1A1 NPIPB9 MIR6862-1 NPIPB8 LAT EIF3C
dgv2831n100 Chr.16:28812594 - 29032542 on Build GRCh38 Gain SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
esv3570454 Chr.16:28799004 - 29032129 on Build GRCh38 Gain SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
nsv571805 Chr.16:28824174 - 29032129 on Build GRCh38 Loss SH2B1 TUFM ATP2A1-AS1 CD19 MIR4517 ATP2A1 NFATC2IP SPNS1 RABEP2 ATXN2L LAT MIR4721
nsv1064483 Chr.16:28620264 - 28857362 on Build GRCh38 Loss SH2B1 TUFM SULT1A1 NPIPB9 MIR6862-2 ATXN2L NPIPB8 EIF3C MIR4721

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