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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89655178 on build GRCh38
Cytoband
16q24.3
Assay ID Hs05446466_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 NP_001076783.1
NM_002768.4 NP_002759.2
NR_046418.2
XM_011523098.1 XP_011521400.1
AF281063.1 AAG01448.1
AK302055.1
BC132711.1
BC132713.1
BG480548.1
BI826757.1
BX363674.2
CF131483.1
D38554.1 BAA07557.1
HY008690.1
HY089525.1
U58048.1 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss DEF8 AFG3L1P LOC105371419 FANCA VPS9D1 LOC107984817 MC1R SPATA33 CENPBD1 TCF25 GAS8-AS1 CHMP1A VPS9D1-AS1 SPATA2L SPIRE2 TUBB3 ZNF276 GAS8 DPEP1 CDK10 DBNDD1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss DEF8 AFG3L1P LOC101927817 MC1R SPG7 SPATA33 GAS8-AS1 VPS9D1-AS1 SPATA2L SPIRE2 TUBB3 URAHP DPEP1 LOC105371414 LOC105371419 PRDM7 FANCA VPS9D1 LOC107984817 SNORD68 CENPBD1 TCF25 CHMP1A LOC100287036 CPNE7 FAM157C ZNF276 TUBB8P7 GAS8 CDK10 ANKRD11 ZNF778 DBNDD1 RPL13
esv2715194 Chr.16:89655195 - 89655689 on Build GRCh38 Deletion CHMP1A
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain SPATA2L SPATA33 DPEP1 CDK10 CHMP1A
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain CPNE7 LOC101927817 SNORD68 SPG7 SPATA33 DPEP1 CHMP1A ANKRD11 RPL13
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss DEF8 RNF166 LOC101927817 MC1R GALNS LOC400558 GAS8-AS1 LOC100129697 SNAI3 SPIRE2 URAHP DPEP1 LOC105371414 SNAI3-AS1 MIR4722 CTU2 CYBA CDH15 PRDM7 VPS9D1 LOC107984817 SNORD68 TRAPPC2L CBFA2T3 FAM157C SLC22A31 ZNF276 TUBB8P7 LOC100289580 CDK10 ANKRD11 AFG3L1P LOC101927793 LOC105371409 SPG7 SPATA33 MVD PIEZO1 ACSF3 CDT1 VPS9D1-AS1 SPATA2L TUBB3 LOC107987238 LOC105371419 FANCA CENPBD1 TCF25 CHMP1A LOC100287036 CPNE7 LINC00304 IL17C GAS8 APRT PABPN1L ZNF778 DBNDD1 LOC339059 RPL13
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion FANCA VPS9D1 SNORD68 SPG7 SPATA33 CHMP1A CPNE7 VPS9D1-AS1 SPATA2L ZNF276 DPEP1 CDK10 RPL13
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain CPNE7 SNORD68 SPG7 SPATA33 DPEP1 CHMP1A RPL13

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