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See other ATF7IP2 CNV Assays ›
Gene Symbol
ATF7IP2
Assay Reference Genome
Location

Chr.16:10440545 on build GRCh38
Cytoband
16p13.13
Assay ID Hs05466596_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 80063

Gene Name:

 activating transcription factor 7 interacting protein 2

Gene Aliases:

 MCAF2

Location:

 Chr.16:10386055-10483640 on Build GRCh38

Assay Gene Location:

 Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATF7IP2 NM_001256160.1 NP_001243089.1
NM_024997.3 NP_079273.2
NR_045815.1
NR_045816.1
XM_006720953.3 XP_006721016.1
XM_011522666.2 XP_011520968.1
XM_017023705.1 XP_016879194.1
XM_017023706.1 XP_016879195.1
XM_017023707.1 XP_016879196.1
XM_017023708.1 XP_016879197.1
XM_017023710.1 XP_016879199.1
XM_017023711.1 XP_016879200.1
AK022730.1 BAB14209.1
AK093414.1 BAC04157.1
AK223492.1 BAD97212.1
AK296565.1
AK299040.1
AL832987.1 CAH56323.1
AY560615.1 AAT66299.1
BC033891.1 AAH33891.1
BC069695.1 AAH69695.1
BC069713.1 AAH69713.1
BC069730.1 AAH69730.1
BC137079.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571451 Chr.16:10435543 - 10495488 on Build GRCh38 Loss ATF7IP2
nsv1051406 Chr.16:10365859 - 10570475 on Build GRCh38 Loss ATF7IP2 EMP2
nsv519263 Chr.16:10386989 - 10466528 on Build GRCh38 Gain+Loss ATF7IP2
dgv4907n54 Chr.16:10388455 - 10504610 on Build GRCh38 Loss ATF7IP2
nsv1036128 Chr.16:10404948 - 10470444 on Build GRCh38 Loss ATF7IP2
nsv1040428 Chr.16:10145408 - 11362136 on Build GRCh38 Gain SOCS1 CLEC16A NUBP1 PRM3 GRIN2A TNP2 TEKT5 ATF7IP2 CIITA EMP2 LOC105371083 MIR548H2 RMI2 PRM1 PRM2 TVP23A LOC107984859 DEXI

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More Information


Additional Information:

For this assay, SNP(s) [rs111917498] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Function(s)


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