Hs05467409_cn

• Gene Symbol: CDH8
• Assay Reference Genome Location: Chr.16:61663129 on build GRCh38
• Cytoband: 16q21

Target Gene Details

• Entrez Gene ID: 1006
• Gene Name: cadherin 8
• Gene Aliases: Nbla04261
• Location: Chr.16:61640435-62036835 on Build GRCh38
• Assay Gene Location: Within Intron 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH8	NM_001796.4			NP_001787.2
	XM_005255760.3			XP_005255817.1
	XM_017022829.1			XP_016878318.1
	AB035305.1			BAA87419.1
	AK124734.1
	BC113416.1
	L34060.1			AAA35628.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3638782	Chr.16:61660192 - 61663839 on Build GRCh38	Loss	CDH8
esv2665598	Chr.16:61660241 - 61663869 on Build GRCh38	Deletion	CDH8
nsv833256	Chr.16:61558794 - 61736777 on Build GRCh38	Gain	CDH8
esv3553541	Chr.16:61660238 - 61663869 on Build GRCh38	Deletion	CDH8
nsv572844	Chr.16:61625455 - 61690440 on Build GRCh38	Loss	CDH8
esv2762088	Chr.16:61220267 - 61799347 on Build GRCh38	Gain+Loss	CDH8

More Information

Additional Information:

For this assay, SNP(s) [rs73570976] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
response to cold
adherens junction organization
synaptic transmission, glutamatergic

Function(s)

calcium ion binding