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Gene Symbol
SLC9A5
Assay Reference Genome
Location

Chr.16:67262237 on build GRCh38
Cytoband
16q22.1
Assay ID Hs05470590_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 6553

Gene Name:

 solute carrier family 9 member A5

Gene Aliases:

 NHE5

Location:

 Chr.16:67247549-67272204 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC9A5 NM_001323971.1 NP_001310900.1
NM_001323972.1 NP_001310901.1
NM_001323973.1 NP_001310902.1
NM_001323974.1 NP_001310903.1
NM_001323975.1 NP_001310904.1
NM_004594.2 NP_004585.1
NR_136664.1
NR_136665.1
NR_136666.1
NR_136667.1
XM_017023594.1 XP_016879083.1
AB209203.1 BAD92440.1
AF111173.1 AAC98696.1
AK021876.1 1 273
AK091748.1 1 1131
AL137689.1 CAB70875.1
BC142671.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv522852 Chr.16:67153308 - 68071571 on Build GRCh38 Gain EXOC3L1 LRRC36 PSMB10 CARMIL2 TRADD NOL3 FAM65A LCAT LOC100131303 THAP11 PARD6A TMEM208 FBXL8 C16orf86 DDX28 E2F4 SLC12A4 CENPT LRRC29 HSD11B2 ZDHHC1 FHOD1 EDC4 ENKD1 TSNAXIP1 PSKH1 RANBP10 NRN1L MIR328 ACD KCTD19 DPEP3 CTRL LOC105369155 KIAA0895L ATP6V0D1 AGRP DUS2 NUTF2 LOC107984813 GFOD2 SLC9A5 HSF4 TPPP3 ELMO3 PLEKHG4 LOC100505942 CTCF DPEP2
nsv827707 Chr.16:67148355 - 67289296 on Build GRCh38 Loss EXOC3L1 E2F4 TRADD B3GNT9 SLC9A5 HSF4 LRRC29 MIR328 ELMO3 C16orf70 NOL3 PLEKHG4 FHOD1 TMEM208 LOC105369155 FBXL8 KIAA0895L
nsv572906 Chr.16:67237955 - 67368685 on Build GRCh38 Loss LRRC36 KCTD19 PLEKHG4 FHOD1 SLC9A5
nsv457513 Chr.16:67181417 - 67282697 on Build GRCh38 Loss EXOC3L1 LRRC29 MIR328 ELMO3 E2F4 PLEKHG4 FHOD1 TMEM208 LOC105369155 KIAA0895L SLC9A5
nsv524492 Chr.16:67174030 - 67294550 on Build GRCh38 Loss EXOC3L1 E2F4 SLC9A5 LRRC29 MIR328 ELMO3 NOL3 KCTD19 PLEKHG4 FHOD1 TMEM208 LOC105369155 KIAA0895L
nsv524363 Chr.16:67136529 - 68071571 on Build GRCh38 Loss EXOC3L1 LRRC36 PSMB10 CARMIL2 TRADD B3GNT9 NOL3 FAM65A LCAT LOC100131303 THAP11 PARD6A TMEM208 FBXL8 C16orf86 DDX28 E2F4 SLC12A4 CENPT LRRC29 HSD11B2 ZDHHC1 FHOD1 EDC4 ENKD1 TSNAXIP1 PSKH1 RANBP10 NRN1L MIR328 ACD KCTD19 DPEP3 CTRL LOC105369155 KIAA0895L ATP6V0D1 AGRP DUS2 NUTF2 LOC107984813 GFOD2 SLC9A5 HSF4 TPPP3 ELMO3 C16orf70 PLEKHG4 LOC100505942 CTCF DPEP2

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More Information


Additional Information:

For this assay, SNP(s) [rs72798023] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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