Hs05582334_cn

• Gene Symbol: CSDC2
• Assay Reference Genome Location: Chr.22:41572120 on build GRCh38
• Cytoband: 22q13.2

Target Gene Details

• Entrez Gene ID: 27254
• Gene Name: cold shock domain containing C2
• Gene Aliases: PIPPIN, dJ347H13.2
• Location: Chr.22:41561010-41576666 on Build GRCh38
• Assay Gene Location: Overlaps Exon 2 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CSDC2	NM_014460.3			NP_055275.1
	AB027011.1			BAA84704.1
	AK313407.1
	AL834417.1			CAD39079.2
	CR456457.1			CAG30343.1
	DB168570.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv516925	Chr.22:41252498 - 41585953 on Build GRCh38	Loss	LOC105373044 PHF5A LOC100996598 ACO2 CSDC2 MIR6889 RANGAP1 PMM1 POLR3H ZC3H7B TEF TOB2
nsv1055166	Chr.22:41536399 - 41622240 on Build GRCh38	Gain	LOC105373044 CSDC2 PMM1 DESI1 POLR3H XRCC6
nsv834209	Chr.22:41563516 - 41746056 on Build GRCh38	Loss	CSDC2 MEI1 C22orf46 PMM1 DESI1 XRCC6 SNU13
nsv3639	Chr.22:41571809 - 41602871 on Build GRCh38	Insertion	CSDC2 PMM1 DESI1
nsv524585	Chr.22:40993505 - 41794305 on Build GRCh38	Loss	MIR1281 PHF5A EP300-AS1 MEI1 PMM1 DESI1 POLR3H TEF SNU13 L3MBTL2 CHADL LOC105373044 LOC100996598 ACO2 CSDC2 MIR6889 C22orf46 RANGAP1 ZC3H7B XRCC6 TOB2 EP300 SNORD140

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
mRNA processing

Function(s)

DNA binding
RNA binding
protein binding
transcription factor binding