Hs05746590_cn

• Gene Symbol: CDA
• Assay Reference Genome Location: Chr.1:20613663 on build GRCh38
• Cytoband: 1p36.12

Target Gene Details

• Entrez Gene ID: 978
• Gene Name: cytidine deaminase
• Gene Aliases: CDD
• Location: Chr.1:20588951-20618908 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDA	NM_001785.2			NP_001776.1
	AJ000474.1			CAA04113.1
	AY634312.2
	BC054036.1			AAH54036.1
	CD675458.1
	L27943.1			AAA57254.1
	S52873.1			AAB24946.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv545731	Chr.1:19989106 - 20776306 on Build GRCh38	Gain	MIR6084 UBXN10-AS1 VWA5B1 MUL1 DDOST PLA2G2C CDA PLA2G2D SH2D5 PLA2G2F PINK1 KIF17 PLA2G5 PINK1-AS LINC01141 FAM43B CAMK2N1 UBXN10 HP1BP3
nsv834369	Chr.1:20609770 - 20779837 on Build GRCh38	Loss	MIR6084 SH2D5 PINK1 KIF17 PINK1-AS DDOST HP1BP3 CDA

More Information

Additional Information:

For this assay, SNP(s) [rs111804927] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

deaminase

Gene Ontology Categories:

Process(es)

cell surface receptor signaling pathway
pyrimidine-containing compound salvage
cytidine deamination
cytosine metabolic process
negative regulation of cell growth
pyrimidine nucleoside salvage
negative regulation of nucleotide metabolic process
protein homotetramerization

Function(s)

nucleoside binding
cytidine deaminase activity
protein binding
zinc ion binding
protein homodimerization activity