Hs05790770_cn

• Gene Symbol: CAPN9
• Assay Reference Genome Location: Chr.1:230759374 on build GRCh38
• Cytoband: 1q42.2

Target Gene Details

• Entrez Gene ID: 10753
• Gene Name: calpain 9
• Gene Aliases: GC36, nCL-4
• Location: Chr.1:230747289-230803356 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CAPN9	NM_001319676.1			NP_001306605.1
	NM_006615.2			NP_006606.1
	NM_016452.2			NP_057536.1
	XM_011544017.1			XP_011542319.1
	XM_011544018.1			XP_011542320.1
	XM_011544019.2			XP_011542321.1
	XM_011544020.1			XP_011542322.1
	XM_017000098.1			XP_016855587.1
	XM_017000099.1			XP_016855588.1
	AB038463.1			BAA92137.1
	AF022799.1			AAB80762.1
	AK298024.1
	AK309039.1
	AK313629.1
	BC027993.1			AAH27993.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3589093	Chr.1:230482037 - 231277190 on Build GRCh38	Gain	C1orf131 LOC101927604 LOC149373 FAM89A LOC101927553 AGT COG2 CAPN9 MIR1182 C1orf198 GNPAT TTC13 TRIM67 ARV1
nsv549335	Chr.1:230733804 - 230797361 on Build GRCh38	Gain	CAPN9
nsv832836	Chr.1:230693328 - 230832263 on Build GRCh38	Loss	COG2 CAPN9 AGT

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

proteolysis
digestion

Function(s)

calcium-dependent cysteine-type endopeptidase activity
calcium ion binding