Hs06018760_cn

• Gene Symbol: EGFLAM
• Assay Reference Genome Location: Chr.5:38402857 on build GRCh38
• Cytoband: 5p13.1

Target Gene Details

• Entrez Gene ID: 133584
• Gene Name: EGF like, fibronectin type III and laminin G domains
• Gene Aliases: AGRINL, AGRNL, PIKA
• Location: Chr.5:38258409-38465480 on Build GRCh38
• Assay Gene Location: Within Intron 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EGFLAM	NM_001205301.1			NP_001192230.1
	NM_152403.3			NP_689616.2
	AK096474.1			BAC04800.1
	AK291602.1
	AL833357.1
	BC063822.1			AAH63822.1
	BX647551.1			CAH56137.1

Target Gene Details

• Entrez Gene ID: 100506475
• Gene Name: EGFLAM antisense RNA 2
• Gene Aliases: -
• Location: Chr.5:38399814-38403471 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
EGFLAM-AS2	NR_102749.1
	NR_102750.1
	AK093278.1
	DB029288.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3604768	Chr.5:38395532 - 38507296 on Build GRCh38	Gain	EGFLAM-AS2 LIFR EGFLAM
esv3604766	Chr.5:38221565 - 38446015 on Build GRCh38	Gain	EGFLAM-AS4 EGFLAM-AS2 EGFLAM
esv3604761	Chr.5:38056637 - 38805862 on Build GRCh38	Gain	LINC01265 EGFLAM-AS4 OSMR-AS1 MIR3650 LOC101929745 EGFLAM-AS2 LIFR LIFR-AS1 EGFLAM

More Information

Additional Information:

For this assay, SNP(s) [rs73749224] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

protease inhibitor

Gene Ontology Categories:

Process(es)

positive regulation of cell-substrate adhesion
peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
extracellular matrix organization

Function(s)

calcium ion binding
glycosaminoglycan binding