Hs06059914_cn

• Gene Symbol: SLC6A18
• Assay Reference Genome Location: Chr.5:1227790 on build GRCh38
• Cytoband: 5p15.33

Target Gene Details

• Entrez Gene ID: 348932
• Gene Name: solute carrier family 6 member 18
• Gene Aliases: Xtrp2
• Location: Chr.5:1225355-1246189 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC6A18	NM_182632.2			NP_872438.2
	AK055798.1			BAB71018.1
	AK298257.1
	BC056757.1			AAH56757.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1033961	Chr.5:1128595 - 1248239 on Build GRCh38	Gain	SLC12A7 SLC6A18 SLC6A19 CTD-3080P12.3
esv3894109	Chr.5:988113 - 1228100 on Build GRCh38	Gain	SLC12A7 SLC6A18 SLC6A19 CTD-3080P12.3 MIR4635 LOC100506688 NKD2
esv3575810	Chr.5:1055511 - 1282578 on Build GRCh38	Gain	SLC12A7 SLC6A18 TERT SLC6A19 CTD-3080P12.3 MIR4635
nsv509044	Chr.5:1147636 - 1265572 on Build GRCh38	Insertion	SLC12A7 SLC6A18 TERT SLC6A19 CTD-3080P12.3
nsv950627	Chr.5:1008886 - 1300685 on Build GRCh38	Deletion	SLC12A7 SLC6A18 TERT SLC6A19 CTD-3080P12.3 MIR4635 NKD2
nsv596629	Chr.5:457146 - 1468172 on Build GRCh38	Gain	ZDHHC11 TERT LOC100288152 PP7080 MIR4457 CLPTM1L BRD9 SLC12A7 LOC100996325 MIR4456 SLC6A3 CEP72 TRIP13 CTD-3080P12.3 MIR4635 LOC100506688 SLC9A3 LPCAT1 LINC01511 TPPP ZDHHC11B SLC6A18 EXOC3 SLC6A19 LOC101929895 NKD2
esv3603797	Chr.5:1086744 - 1259707 on Build GRCh38	Gain	SLC12A7 SLC6A18 TERT SLC6A19 CTD-3080P12.3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

primary active transporter

Gene Ontology Categories:

Process(es)

amino acid transmembrane transport
neurotransmitter transport
amino acid transport

Function(s)

neurotransmitter:sodium symporter activity
amino acid transmembrane transporter activity