Hs06138596_cn

• Gene Symbol: TJAP1
• Assay Reference Genome Location: Chr.6:43495607 on build GRCh38
• Cytoband: 6p21.1

Target Gene Details

• Entrez Gene ID: 93643
• Gene Name: tight junction associated protein 1
• Gene Aliases: PILT, TJP4
• Location: Chr.6:43477523-43506557 on Build GRCh38
• Assay Gene Location: Within Intron 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TJAP1	NM_001146016.1			NP_001139488.1
	NM_001146017.1			NP_001139489.1
	NM_001146018.1			NP_001139490.1
	NM_001146019.1			NP_001139491.1
	NM_001146020.1			NP_001139492.1
	NM_080604.2			NP_542171.2
	NR_027394.1
	XM_006715249.1			XP_006715312.1
	XM_006715250.3			XP_006715313.1
	XM_006715251.2			XP_006715314.1
	XM_006715252.2			XP_006715315.1
	XM_006715254.3			XP_006715317.1
	XM_006715256.1			XP_006715319.1
	XM_006715257.2			XP_006715320.1
	XM_006715259.3			XP_006715322.1
	XM_006715260.1			XP_006715323.1
	XM_006715261.1			XP_006715324.1
	XM_006715262.2			XP_006715325.1
	XM_006715263.2			XP_006715326.1
	XM_006715265.1			XP_006715328.1
	XM_006715266.1			XP_006715329.1
	XM_006715267.2			XP_006715330.1
	XM_006715268.2			XP_006715331.1
	XM_006715269.2			XP_006715332.1
	XM_006715270.1			XP_006715333.1
	XM_011514995.1			XP_011513297.1
	XM_011514996.1			XP_011513298.1
	XM_017011488.1			XP_016866977.1
	XM_017011489.1			XP_016866978.1
	XM_017011490.1			XP_016866979.1
	XM_017011491.1			XP_016866980.1
	XM_017011492.1			XP_016866981.1
	XM_017011493.1			XP_016866982.1
	AK024269.1			BAB14867.1
	AK123398.1
	AK127338.1
	AK225787.1
	AK307483.1
	AK308866.1
	AK309119.1
	BC046239.1
	BC064401.1			AAH64401.1
	DA018836.1
	DA051961.1
	DA098538.1
	DA297698.1
	DA415818.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv603000	Chr.6:43397622 - 43524840 on Build GRCh38	Loss	TJAP1 POLR1C XPO5 YIPF3 LRRC73 ABCC10 MIR6780B DLK2
nsv950173	Chr.6:43487563 - 43513862 on Build GRCh38	Deletion	TJAP1 YIPF3 LRRC73

More Information

Additional Information:

For this assay, SNP(s) [rs73426727] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

tight junction

Gene Ontology Categories:

Process(es)

Golgi organization

Function(s)

protein binding