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Gene Symbol
DDR1
Assay Reference Genome
Location

Chr.6:30886548 on build GRCh38
Cytoband
6p21.33
Assay ID Hs06160795_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 780

Gene Name:

 discoidin domain receptor tyrosine kinase 1

Gene Aliases:

 CAK, CD167, DDR, EDDR1, HGK2, MCK10, NEP, NTRK4, PTK3, PTK3A, RTK6, TRKE

Location:

 Chr.6:30880909-30900156 on Build GRCh38

Assay Gene Location:

 Within Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DDR1 NM_001202523.1 NP_001189452.1
NM_001297652.1 NP_001284581.1
NM_001297653.1 NP_001284582.1
NM_001297654.1 NP_001284583.1
NM_001954.4 NP_001945.3
NM_013993.2 NP_054699.2
XM_006715185.2 XP_006715248.1
XM_011514882.2 XP_011513184.1
XM_011514883.1 XP_011513185.1
XM_011514884.1 XP_011513186.1
XM_011514885.1 XP_011513187.1
XM_011514886.1 XP_011513188.1
XM_011514887.1 XP_011513189.1
XM_011514888.2 XP_011513190.1
XM_017011268.1 XP_016866757.1
XM_017011269.1 XP_016866758.1
AB210021.1
AK291621.1
AK294793.1
AK295643.1
BC008716.2 AAH08716.1
BC013400.2 AAH13400.1
BC070070.1 AAH70070.1
CN362335.1
DA461082.1
DC369107.1
L11315.1 AAA02866.1
L20817.1 AAA18019.1
L57508.1 AAB05208.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv5245 Chr.6:30866574 - 30899725 on Build GRCh38 Insertion DDR1 MIR4640
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR10C1 HCG17 UBD VARS2 DPCR1 HCG18 ZFP57 HLA-B LOC105375014 MICA OR5V1 LOC101929006 TRIM31 IFITM4P HLA-H HCG22 PSORS1C3 MIR4640 OR14J1 GABBR1 ZNRD1ASP C6orf136 LINC01015 OR2H2 PPP1R11 HLA-A TRIM26 IER3 DDR1 TRIM40 HLA-G MIR6891 TRIM39 OR12D2 GTF2H4 SNORD32B TRIM39-RPP21 MAS1L ABCF1 OR2J2 PSORS1C1 OR2H1 TRIM31-AS1 TUBB MDC1-AS1 RNF39 LINC00243 RPP21 TRIM10 MDC1 HLA-E PPP1R10 NRM LOC554223 GNL1 SFTA2 HCG4B HLA-F-AS1 HLA-L PRR3 HCG4 HCG27 ATAT1 HLA-C POU5F1 OR11A1 MUC21 MOG MUC22 TCF19 C6orf15 PPP1R18 PSORS1C2 HLA-F HCG8 HCG20 MRPS18B HLA-J CCHCR1 HLA-K MIR877 FLOT1 TRIM15 OR12D3 HCG9 DHX16 CDSN ZNRD1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss MDC1 HLA-E PPP1R10 NRM GNL1 VARS2 DPCR1 SFTA2 LOC105375014 PRR3 HCG22 PSORS1C3 HCG27 MIR4640 ATAT1 HLA-C POU5F1 C6orf136 MUC21 MUC22 IER3 TCF19 DDR1 C6orf15 PPP1R18 PSORS1C2 HCG20 MRPS18B CCHCR1 GTF2H4 MIR877 FLOT1 ABCF1 DHX16 PSORS1C1 TUBB CDSN MDC1-AS1 LINC00243
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR10C1 HCG17 OR2W1 UBD LINC00533 VARS2 DPCR1 HCG18 LINC01556 ZFP57 LOC105375014 OR5V1 LOC101929006 TRIM31 IFITM4P HLA-H HCG22 PSORS1C3 MIR4640 OR14J1 GABBR1 ZNRD1ASP C6orf136 LINC01015 OR2H2 LINC01623 PPP1R11 TRIM27 HLA-A TRIM26 IER3 DDR1 TRIM40 HLA-G HCG16 TRIM39 OR12D2 GTF2H4 SNORD32B TRIM39-RPP21 MAS1L ABCF1 OR2J2 PSORS1C1 OR2H1 TRIM31-AS1 LOC100129636 TUBB MDC1-AS1 RNF39 LINC00243 RPP21 TRIM10 MDC1 HLA-E PPP1R10 NRM LOC554223 GNL1 SFTA2 HCG4B HLA-F-AS1 HLA-L PRR3 HCG4 HCG27 OR2B3 ATAT1 POU5F1 ZNF311 OR11A1 MUC21 MOG MUC22 TCF19 C6orf15 PPP1R18 PSORS1C2 HLA-F HCG8 HCG20 MRPS18B HLA-J CCHCR1 HLA-K OR2J3 MIR877 FLOT1 TRIM15 OR12D3 HCG9 DHX16 CDSN HCG14 ZNRD1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion HCG17 VARS2 DPCR1 HCG18 LOC105375014 TRIM31 IFITM4P HLA-H HCG22 PSORS1C3 MIR4640 ZNRD1ASP C6orf136 PPP1R11 HLA-A TRIM26 IER3 DDR1 TRIM40 HLA-G TRIM39 GTF2H4 TRIM39-RPP21 ABCF1 PSORS1C1 TRIM31-AS1 TUBB MDC1-AS1 RNF39 LINC00243 RPP21 TRIM10 MDC1 HLA-E PPP1R10 NRM LOC554223 GNL1 SFTA2 HCG4B HLA-F-AS1 HLA-L PRR3 HCG4 HCG27 ATAT1 HLA-C POU5F1 MUC21 MUC22 TCF19 C6orf15 PPP1R18 PSORS1C2 HLA-F HCG8 HCG20 MRPS18B HLA-J CCHCR1 HLA-K MIR877 FLOT1 TRIM15 HCG9 DHX16 CDSN ZNRD1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion MDC1 HLA-E PPP1R10 NRM GNL1 VARS2 DPCR1 SFTA2 LOC105375014 PRR3 HCG22 PSORS1C3 HCG27 MIR4640 ATAT1 HLA-C POU5F1 C6orf136 MUC21 MUC22 IER3 TCF19 DDR1 C6orf15 PPP1R18 PSORS1C2 HCG20 MRPS18B CCHCR1 GTF2H4 MIR877 FLOT1 ABCF1 DHX16 PSORS1C1 TUBB CDSN MDC1-AS1 LINC00243
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss HCG17 VARS2 DPCR1 HCG18 LOC105375014 TRIM31 HLA-H HCG22 PSORS1C3 MIR4640 ZNRD1ASP C6orf136 PPP1R11 HLA-A TRIM26 IER3 DDR1 TRIM40 TRIM39 GTF2H4 TRIM39-RPP21 ABCF1 PSORS1C1 TRIM31-AS1 TUBB MDC1-AS1 RNF39 LINC00243 RPP21 TRIM10 MDC1 HLA-E PPP1R10 NRM GNL1 SFTA2 HCG4B HLA-L PRR3 HCG27 ATAT1 HLA-C POU5F1 MUC21 MUC22 TCF19 C6orf15 PPP1R18 PSORS1C2 HCG8 HCG20 MRPS18B HLA-J CCHCR1 HLA-K MIR877 FLOT1 TRIM15 HCG9 DHX16 CDSN ZNRD1
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MDC1 PPP1R10 NRM GNL1 VARS2 DPCR1 SFTA2 LOC105375014 PRR3 HCG22 MIR4640 ATAT1 C6orf136 MUC21 MUC22 IER3 DDR1 PPP1R18 HCG20 MRPS18B GTF2H4 MIR877 FLOT1 ABCF1 DHX16 TUBB MDC1-AS1 LINC00243
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication HCG17 VARS2 DPCR1 HCG18 HLA-B LOC105375014 MICA TRIM31 HCG22 PSORS1C3 HCG26 MIR4640 ZNRD1ASP C6orf136 PPP1R11 TRIM26 IER3 DDR1 TRIM40 MIR6891 TRIM39 GTF2H4 TRIM39-RPP21 ABCF1 PSORS1C1 TRIM31-AS1 TUBB MDC1-AS1 RNF39 LINC00243 RPP21 TRIM10 MDC1 HLA-E PPP1R10 NRM GNL1 SFTA2 HLA-L PRR3 HCG27 ATAT1 HLA-C POU5F1 MUC21 MUC22 TCF19 C6orf15 PPP1R18 PSORS1C2 LOC102725068 HCG8 HCG20 MRPS18B HLA-J CCHCR1 HCP5 MIR877 FLOT1 TRIM15 DHX16 CDSN ZNRD1

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