Assay Details

Target Gene Details

Entrez Gene ID:	1015
Gene Name:	cadherin 17
Gene Aliases:	CDH16, HPT-1, HPT1
Location:	Chr.8:94127162-94217303 on Build GRCh38
Assay Gene Location:	Within Intron 18

Gene Symbol	Transcript Accession	Protein ID
CDH17	NM_001144663.1	NP_001138135.1
	NM_004063.3	NP_004054.3
	XM_011516790.1	XP_011515092.1
	AK130441.1
	AK300638.1
	AK301001.1
	AK312873.1
	BC112013.1	AAI12014.1
	BC113464.1
	U07969.1	AAA19021.1
	X83228.1	CAA58231.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1022473	Chr.8:91854892 - 94250166 on Build GRCh38	Loss	LINC00535 FAM92A1 PDP1 CDH17 TMEM67 LOC105375640 FLJ46284 LOC102724710 TRIQK RBM12B RBM12B-AS1 GEM RUNX1T1 MIR8084 C8orf87 MIR378D2

More Information

Additional Information:

For this assay, SNP(s) [rs73697104] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

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System Message

Genomic Map

Assay Details

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location: