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System Message

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Gene Symbol: TMPRSS4
Assay Reference Genome Location: Chr.11:118093414 on build GRCh38
Cytoband: 11q23.3

Assay ID

Hs06282032_cn

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Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	56649
Gene Name:	transmembrane protease, serine 4
Gene Aliases:	CAPH2, MT-SP2, TMPRSS3
Location:	Chr.11:118077012-118125505 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMPRSS4	NM_001083947.1			NP_001077416.1
	NM_001173551.1			NP_001167022.1
	NM_001173552.1			NP_001167023.1
	NM_001290094.1			NP_001277023.1
	NM_001290096.1			NP_001277025.1
	NM_019894.3			NP_063947.1
	NR_110734.1
	XM_005271613.3			XP_005271670.1
	XM_005271614.2			XP_005271671.1
	XM_005271615.3			XP_005271672.1
	XM_011542901.2			XP_011541203.1
	XM_011542902.2			XP_011541204.1
	XM_011542903.2			XP_011541205.1
	XM_011542904.2			XP_011541206.1
	AF179224.1			AAF74526.1
	AF216312.1			AAF31436.1
	AK172766.1			BAD18749.1
	AK290361.1
	AK296855.1
	AK303173.1
	AK304113.1
	AK304215.1
	AK308434.1
	AK311290.1
	AY358530.1			AAQ88894.1
	BC011703.2			AAH11703.1
	BP220493.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv468878	Chr.11:118076983 - 118161527 on Build GRCh38	Gain	TMPRSS4 TMPRSS4-AS1 SCN4B
esv3892103	Chr.11:118081382 - 118161527 on Build GRCh38	Gain	TMPRSS4 TMPRSS4-AS1 SCN4B
nsv1049373	Chr.11:118066351 - 118134273 on Build GRCh38	Loss	TMPRSS4 TMPRSS4-AS1 SCN4B
nsv556463	Chr.11:118061915 - 118099611 on Build GRCh38	Loss	TMPRSS4 TMPRSS4-AS1
nsv1159938	Chr.11:118075976 - 118157452 on Build GRCh38	Duplication	TMPRSS4 TMPRSS4-AS1 SCN4B
nsv509444	Chr.11:118033438 - 118117536 on Build GRCh38	Insertion	TMPRSS4 TMPRSS4-AS1

More Information

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)

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