Hs06329831_cn

• Gene Symbol: KDM2A
• Assay Reference Genome Location: Chr.11:67143373 on build GRCh38
• Cytoband: 11q13.2

Target Gene Details

• Entrez Gene ID: 22992
• Gene Name: lysine demethylase 2A
• Gene Aliases: CXXC8, FBL11, FBL7, FBXL11, JHDM1A, LILINA
• Location: Chr.11:67119210-67258082 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KDM2A	NM_012308.2			NP_036440.1
	NR_027473.1
	XM_011544860.2			XP_011543162.1
	XM_017017391.1			XP_016872880.1
	AB023221.2
	AK024505.1			BAB15795.1
	BC047486.1			AAH47486.1
	BC064360.1			AAH64360.1
	JQ710741.1
	JQ710742.1
	JQ710743.1
	JQ710744.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv1976n54	Chr.11:67141279 - 67149366 on Build GRCh38	Loss	KDM2A
esv2661599	Chr.11:67139759 - 67149939 on Build GRCh38	Deletion	KDM2A
nsv555252	Chr.11:67143355 - 67148921 on Build GRCh38	Loss	KDM2A
esv3626707	Chr.11:67139805 - 67149822 on Build GRCh38	Loss	KDM2A
esv23935	Chr.11:67139958 - 67149624 on Build GRCh38	Loss	KDM2A

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

double-strand break repair via nonhomologous end joining
transcription, DNA-templated
regulation of transcription, DNA-templated
oxidation-reduction process
histone H3-K36 demethylation

Function(s)

DNA binding
zinc ion binding
histone demethylase activity
histone demethylase activity (H3-K36 specific)