Hs06609910_cn

• Gene Symbol: IQCJ-SCHIP1
• Assay Reference Genome Location: Chr.3:159289893 on build GRCh38
• Cytoband: 3q25.32

Target Gene Details

• Entrez Gene ID: 100505385
• Gene Name: IQCJ-SCHIP1 readthrough
• Gene Aliases: -
• Location: Chr.3:159069252-159897366 on Build GRCh38
• Assay Gene Location: Within Intron 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
IQCJ-SCHIP1	NM_001197113.1			NP_001184042.1
	NM_001197114.1			NP_001184043.1
	AK096479.1
	DQ157847.1
	DQ157848.1

Target Gene Details

• Entrez Gene ID: 29970
• Gene Name: schwannomin interacting protein 1
• Gene Aliases: SCHIP-1
• Location: Chr.3:159273247-159897366 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SCHIP1	NM_001197107.1			NP_001184036.1
	NM_001197108.1			NP_001184037.1
	NM_014575.3			NP_055390.1
	AF145713.1			AAF34241.1
	AF145714.1			AAF34242.1
	AF145715.1			AAF34243.1
	AK314662.1
	BC036535.2			AAH36535.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470971	Chr.3:158873139 - 159440428 on Build GRCh38	Gain	MIR3919 IQCJ LOC105374181 IQCJ-SCHIP1 SCHIP1
nsv998949	Chr.3:159057017 - 159676761 on Build GRCh38	Gain	MIR3919 IQCJ IQCJ-SCHIP1 SCHIP1

More Information

Additional Information:

For this assay, SNP(s) [rs76964096,rs79617810] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
identical protein binding