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System Message

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Gene Symbol: SLC41A3
Assay Reference Genome Location: Chr.3:126035420 on build GRCh38
Cytoband: 3q21.2

Assay ID

Hs06615805_cn

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Catalog #	4400291
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Genomic Map
Assay Details
More Information

Assay Details

Target Gene Details

Entrez Gene ID:	54946
Gene Name:	solute carrier family 41 member 3
Gene Aliases:	SLC41A1-L2
Location:	Chr.3:126006357-126101550 on Build GRCh38
Assay Gene Location:	Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC41A3	NM_001008485.1			NP_001008485.1
	NM_001008486.1			NP_001008486.1
	NM_001008487.1			NP_001008487.1
	NM_001164475.1			NP_001157947.1
	NM_017836.3			NP_060306.3
	XM_005247559.1			XP_005247616.1
	XM_005247562.1			XP_005247619.1
	XM_005247563.2			XP_005247620.1
	XM_005247564.1			XP_005247621.1
	XM_005247565.2			XP_005247622.1
	XM_006713681.2			XP_006713744.1
	XM_011512945.1			XP_011511247.1
	XM_017006705.1			XP_016862194.1
	XM_017006706.1			XP_016862195.1
	XM_017006707.1			XP_016862196.1
	XM_017006708.1			XP_016862197.1
	XM_017006709.1			XP_016862198.1
	AK000480.1			BAA91192.1
	AK021925.1			BAB13938.1
	AK022780.1			BAB14241.1
	AK091671.1			BAC03717.1
	AK093380.1
	AK298070.1
	AK307107.1
	AL560923.3
	BC009039.2			AAH09039.1
	BC028241.1			AAH28241.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1009333	Chr.3:126006809 - 126041785 on Build GRCh38	Loss	SLC41A3
nsv524971	Chr.3:126024828 - 126155545 on Build GRCh38	Loss	SLC41A3 ALDH1L1 ALDH1L1-AS1
nsv591492	Chr.3:126014238 - 126076708 on Build GRCh38	Gain	SLC41A3
nsv591465	Chr.3:125283331 - 126140524 on Build GRCh38	Gain	LOC105374312 SLC41A3 ROPN1B MIR548I1 ALG1L ALDH1L1 FAM86JP LOC101927056 OSBPL11 ZNF148 ALDH1L1-AS1 SNX4
nsv829716	Chr.3:125928159 - 126116976 on Build GRCh38	Gain+Loss	SLC41A3 ROPN1B ALG1L ALDH1L1 FAM86JP ALDH1L1-AS1
nsv1011457	Chr.3:125287676 - 126146923 on Build GRCh38	Gain	LOC105374312 SLC41A3 ROPN1B MIR548I1 ALG1L ALDH1L1 FAM86JP LOC101927056 OSBPL11 ZNF148 ALDH1L1-AS1 SNX4

More Information

Set Membership:

Intragenic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter

Gene Ontology Categories:

Function(s) Process(es)

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