Hs06908578_cn

• Gene Symbol: PRRX2
• Assay Reference Genome Location: Chr.9:129715896 on build GRCh38
• Cytoband: 9q34.11

Target Gene Details

• Entrez Gene ID: 51450
• Gene Name: paired related homeobox 2
• Gene Aliases: PMX2, PRX2
• Location: Chr.9:129665641-129722674 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRRX2	NM_016307.3			NP_057391.1
	XM_017014803.1			XP_016870292.1
	AF061970.1			AAF17708.1
	BC014645.1			AAH14645.1

Target Gene Details

• Entrez Gene ID: 101929437
• Gene Name: PRRX2 antisense RNA 1
• Gene Aliases: -
• Location: Chr.9:129712894-129718706 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PRRX2-AS1	NR_132102.1
	AA993927.1
	BX110190.1
	HY035685.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1046477	Chr.9:129608081 - 129997996 on Build GRCh38	Gain	PRRX2-AS1 ASB6 TOR1B USP20 TOR1A PRRX2 NTMT1 FNBP1 MIR6855 PTGES C9orf50 C9orf78
esv3621839	Chr.9:129701704 - 129885823 on Build GRCh38	Loss	PRRX2-AS1 TOR1B USP20 TOR1A PRRX2 MIR6855 PTGES C9orf78
nsv615497	Chr.9:129687477 - 129735271 on Build GRCh38	Loss	PRRX2-AS1 PRRX2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
multicellular organism development

Function(s)

transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding