Hs06912032_cn

• Gene Symbol: SLC44A1
• Assay Reference Genome Location: Chr.9:105250285 on build GRCh38
• Cytoband: 9q31.1

Target Gene Details

• Entrez Gene ID: 23446
• Gene Name: solute carrier family 44 member 1
• Gene Aliases: CD92, CDW92, CHTL1, CTL1
• Location: Chr.9:105244608-105438504 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC44A1	NM_001286730.1			NP_001273659.1
	NM_080546.4			NP_536856.2
	XM_005251855.4			XP_005251912.1
	XM_017014559.1			XP_016870048.1
	XM_017014560.1			XP_016870049.1
	AJ272365.1			CAC82175.1
	AJ420812.1			CAD12764.1
	BC049203.1			AAH49203.1
	CD101684.1
	CF994263.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831678	Chr.9:105161241 - 105350532 on Build GRCh38	Gain+Loss	SLC44A1
esv3891706	Chr.9:104480016 - 105304573 on Build GRCh38	Gain	ABCA1 OR13C8 OR13F1 OR13C9 SLC44A1 OR13C5 OR13D1 OR13C2 LOC105376196 NIPSNAP3B NIPSNAP3A OR13C3 OR13C4
esv3891705	Chr.9:104391828 - 106660921 on Build GRCh38	Loss	TAL2 ABCA1 MIR8081 OR13C8 OR13F1 FSD1L OR13C9 TMEM38B FKTN SLC44A1 OR13C5 LINC01505 OR13D1 OR13C2 RALGAPA1P1 LOC105376196 NIPSNAP3B NIPSNAP3A OR13C3 OR13C4

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter, secondary carrier transporter

Gene Ontology Categories:

Process(es)

phosphatidylcholine biosynthetic process
choline transport
choline catabolic process
transmembrane transport

Function(s)

choline transmembrane transporter activity