Hs07170293_cn

• Gene Symbol: TMEM239
• Assay Reference Genome Location: Chr.20:2817386 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 100288797
• Gene Name: transmembrane protein 239
• Gene Aliases: -
• Location: Chr.20:2815871-2820284 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM239	NM_001167670.2	2	957	NP_001161142.1
	NM_001318207.1	2	994	NP_001305136.1
	XM_011529128.2	2	1374	XP_011527430.1
	XM_011529129.2	2	922	XP_011527431.1
	AK126033.1	2	994	BAC86404.1
	DB337508.1	1	346

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv518364	Chr.20:2807348 - 2820763 on Build GRCh38	Loss	TMEM239 C20orf141
esv3645020	Chr.20:2816405 - 2926274 on Build GRCh38	Gain	PTPRA VPS16 PCED1A TMEM239
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	IDH3B NOP56 SNORD86 VPS16 EBF4 SNORD57 TMEM239 SNORD56 SNORA51 C20orf141 SNORD110 PTPRA MIR1292 CPXM1 PCED1A
nsv510780	Chr.20:2746049 - 2832153 on Build GRCh38	Deletion	CPXM1 EBF4 TMEM239 C20orf141
nsv522009	Chr.20:2745032 - 3030542 on Build GRCh38	Gain	PTPRA CPXM1 VPS16 EBF4 PCED1A TMEM239 C20orf141
nsv833895	Chr.20:2730164 - 2882236 on Build GRCh38	Loss	PTPRA CPXM1 VPS16 EBF4 PCED1A TMEM239 C20orf141
esv2762056	Chr.20:2740745 - 2944353 on Build GRCh38	Gain	PTPRA CPXM1 VPS16 EBF4 PCED1A TMEM239 C20orf141

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding