Hs07170326_cn

• Gene Symbol: GPCPD1
• Assay Reference Genome Location: Chr.20:5551108 on build GRCh38
• Cytoband: 20p12.3

Target Gene Details

• Entrez Gene ID: 56261
• Gene Name: glycerophosphocholine phosphodiesterase 1
• Gene Aliases: EDI3, GDE5, GDPD6, PREI4
• Location: Chr.20:5544434-5611026 on Build GRCh38
• Assay Gene Location: Within Intron 21

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPCPD1	NM_019593.3			NP_062539.1
	XM_005260758.4			XP_005260815.1
	XM_005260761.1			XP_005260818.1
	XM_006723596.3			XP_006723659.1
	AB037855.1
	AK001947.1			BAA91994.1
	AL833069.1
	BC027588.2			AAH27588.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4242n100	Chr.20:5464900 - 5825417 on Build GRCh38	Gain	GPCPD1 LOC101929207 LOC643406 C20orf196 LINC00654
esv2762059	Chr.20:5326723 - 5742731 on Build GRCh38	Gain	GPCPD1 LOC101929207 LOC643406 LINC00654 LINC00658
nsv585328	Chr.20:5546530 - 5574162 on Build GRCh38	Loss	GPCPD1
dgv4241n100	Chr.20:5432523 - 5731197 on Build GRCh38	Gain	GPCPD1 LOC101929207 LOC643406 LINC00654 LINC00658
nsv1066860	Chr.20:4973849 - 5652866 on Build GRCh38	Gain	PCNA PCNA-AS1 PROKR2 GPCPD1 LOC101929207 CDS2 LOC643406 LINC00654 LINC00658 LOC728283 TMEM230 SLC23A2

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

hydrolase, phosphodiesterase, metabolite interconversion enzyme

Gene Ontology Categories:

Process(es)

skeletal muscle tissue development
cellular phosphate ion homeostasis
glycerophospholipid catabolic process

Function(s)

glycerophosphodiester phosphodiesterase activity
glycerophosphocholine phosphodiesterase activity
starch binding