Genomic Map
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Target Gene Details
Entrez Gene ID: | 5786 |
Gene Name: | protein tyrosine phosphatase, receptor type A |
Gene Aliases: |
HEPTP, HLPR, HPTPA, HPTPalpha, LRP, PTPA, PTPRL2, R-PTP-alpha, RPTPA |
Location: |
Chr.20:2864195-3038669 on Build GRCh38 |
Assay Gene Location: | Within Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| PTPRA | NM_002836.3 | NP_002827.1 | ||
| NM_080840.2 | NP_543030.1 | |||
| AB209702.1 | BAD92939.1 | |||
| AK290233.1 | ||||
| AK294499.1 | ||||
| AK294990.1 | ||||
| AK297293.1 | ||||
| BC027308.1 | AAH27308.1 | |||
| BI597187.1 | ||||
| BQ213974.1 | ||||
| BX571753.1 | CAE11878.1 | |||
| M34668.1 | AAA36528.1 | |||
| X54890.1 | CAA38662.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3645020 | Chr.20:2816405 - 2926274 on Build GRCh38 | Gain |
 PCED1A
VPS16
TMEM239
PTPRA
|
| nsv1057464 | Chr.20:2650623 - 2989686 on Build GRCh38 | Gain |
NOP56
C20orf141
VPS16
SNORD86
CPXM1
SNORD56
SNORA51
PCED1A
TMEM239
IDH3B
SNORD57
SNORD110
MIR1292
EBF4
PTPRA
|
| nsv522009 | Chr.20:2745032 - 3030542 on Build GRCh38 | Gain |
PCED1A
C20orf141
VPS16
TMEM239
CPXM1
EBF4
PTPRA
|
| esv2762056 | Chr.20:2740745 - 2944353 on Build GRCh38 | Gain |
PCED1A
C20orf141
VPS16
TMEM239
CPXM1
EBF4
PTPRA
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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