Hs07199477_cn

• Gene Symbol: TMEM239
• Assay Reference Genome Location: Chr.20:2820270 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 100288797
• Gene Name: transmembrane protein 239
• Gene Aliases: -
• Location: Chr.20:2815871-2820284 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM239	NM_001318207.1			NP_001305136.1
	AK126033.1			BAC86404.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv518364	Chr.20:2807348 - 2820763 on Build GRCh38	Loss	TMEM239 C20orf141
esv3645020	Chr.20:2816405 - 2926274 on Build GRCh38	Gain	TMEM239 VPS16 PCED1A PTPRA
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	SNORD110 TMEM239 VPS16 SNORD86 CPXM1 PCED1A IDH3B NOP56 SNORA51 PTPRA EBF4 C20orf141 SNORD57 MIR1292 SNORD56
nsv510780	Chr.20:2746049 - 2832153 on Build GRCh38	Deletion	TMEM239 CPXM1 C20orf141 EBF4
nsv522009	Chr.20:2745032 - 3030542 on Build GRCh38	Gain	TMEM239 VPS16 CPXM1 C20orf141 PCED1A PTPRA EBF4
nsv833895	Chr.20:2730164 - 2882236 on Build GRCh38	Loss	TMEM239 VPS16 CPXM1 C20orf141 PCED1A PTPRA EBF4
esv2762056	Chr.20:2740745 - 2944353 on Build GRCh38	Gain	TMEM239 VPS16 CPXM1 C20orf141 PCED1A PTPRA EBF4

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding