Hs07209323_cn

• Gene Symbol: TMEM239
• Assay Reference Genome Location: Chr.20:2818001 on build GRCh38
• Cytoband: 20p13

Target Gene Details

• Entrez Gene ID: 100288797
• Gene Name: transmembrane protein 239
• Gene Aliases: -
• Location: Chr.20:2815871-2820284 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM239	NM_001167670.2	2	1572	NP_001161142.1
	NM_001318207.1	2	1609	NP_001305136.1
	XM_011529128.2	2	1989	XP_011527430.1
	XM_011529129.2	2	1537	XP_011527431.1
	AI383461.1	1	61
	AK126033.1	2	1609	BAC86404.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv518364	Chr.20:2807348 - 2820763 on Build GRCh38	Loss	TMEM239 C20orf141
esv3645020	Chr.20:2816405 - 2926274 on Build GRCh38	Gain	TMEM239 PTPRA PCED1A VPS16
nsv1057464	Chr.20:2650623 - 2989686 on Build GRCh38	Gain	SNORA51 SNORD110 SNORD56 CPXM1 SNORD57 VPS16 EBF4 MIR1292 TMEM239 PTPRA IDH3B C20orf141 NOP56 PCED1A SNORD86
nsv510780	Chr.20:2746049 - 2832153 on Build GRCh38	Deletion	EBF4 TMEM239 C20orf141 CPXM1
nsv522009	Chr.20:2745032 - 3030542 on Build GRCh38	Gain	EBF4 TMEM239 PTPRA C20orf141 CPXM1 PCED1A VPS16
nsv833895	Chr.20:2730164 - 2882236 on Build GRCh38	Loss	EBF4 TMEM239 PTPRA C20orf141 CPXM1 PCED1A VPS16
esv2762056	Chr.20:2740745 - 2944353 on Build GRCh38	Gain	EBF4 TMEM239 PTPRA C20orf141 CPXM1 PCED1A VPS16

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding