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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88943205 on build GRCh38
Cytoband
16q24.3
Assay ID Hs07402570_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 NP_005178.4
XM_005256323.4 XP_005256380.1
XM_011523419.2 XP_011521721.1
XM_017023811.1 XP_016879300.1
AB010419.1 BAA29061.1
AK314766.1
BC047019.1
BC062624.1 AAH62624.1
BP282804.1

Target Gene Details

Entrez Gene ID:

 100129697

Gene Name:

 uncharacterized LOC100129697

Gene Aliases:

 -

Location:

 Chr.16:88940039-88951524 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100129697 NM_001290330.1 NP_001277259.1
AK130238.1 BAC85311.1
HY074528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss LOC107987238 LOC101927793 TRAPPC2L CDT1 CBFA2T3 GALNS LOC100129697 PABPN1L APRT LOC105371409 PIEZO1
nsv1066077 Chr.16:88916836 - 89035141 on Build GRCh38 Gain CBFA2T3 LOC100129697 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC107987238 TRAPPC2L MIR4722 GALNS LOC100129697 PABPN1L LINC00304 CDH15 PIEZO1 LOC101927793 SLC22A31 LOC400558 CDT1 CTU2 ACSF3 ZNF778 CBFA2T3 LOC339059 APRT LOC105371409 LOC100289580
nsv573719 Chr.16:88933306 - 88957164 on Build GRCh38 Loss CBFA2T3 LOC100129697
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC107987238 TRAPPC2L GALNS LOC100129697 PABPN1L LINC00304 CDH15 LOC101927793 SLC22A31 LOC400558 CDT1 ACSF3 CBFA2T3 APRT LOC105371409
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC107987238 TRAPPC2L ANKRD11 LOC105371414 GALNS LOC100129697 LOC100287036 PABPN1L LINC00304 CDH15 PIEZO1 LOC101927793 SLC22A31 LOC400558 CDT1 ACSF3 ZNF778 CBFA2T3 LOC339059 APRT LOC105371409 LOC100289580
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC107987238 TRAPPC2L GALNS LOC100129697 PABPN1L LINC00304 CDH15 LOC101927793 LOC400558 CDT1 ACSF3 CBFA2T3 APRT LOC105371409
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion LOC107987238 LOC101927793 TRAPPC2L CDT1 CBFA2T3 GALNS LOC100129697 PABPN1L APRT LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC107987238 LOC101927817 SNAI3 IL17C TUBB8P7 TRAPPC2L MIR4722 CENPBD1 ZNF276 SPIRE2 LOC100287036 CDK10 URAHP CTU2 SPG7 DPEP1 CBFA2T3 AFG3L1P DEF8 LOC105371409 LOC107984817 RNF166 SNORD68 GALNS MC1R PIEZO1 CYBA VPS9D1 LOC101927793 CHMP1A ACSF3 APRT SPATA2L ANKRD11 CPNE7 LOC105371414 SPATA33 DBNDD1 PABPN1L SLC22A31 RPL13 PRDM7 FAM157C LOC339059 TCF25 LOC100289580 GAS8 LOC105371419 SNAI3-AS1 GAS8-AS1 LOC100129697 LINC00304 CDH15 TUBB3 LOC400558 CDT1 MVD FANCA VPS9D1-AS1 ZNF778
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC107987238 TRAPPC2L MIR4722 GALNS LOC100129697 PABPN1L PIEZO1 LOC101927793 CDT1 CTU2 CBFA2T3 LOC339059 APRT LOC105371409 LOC100289580

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