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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341061 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07405616_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1 1 140
AK095200.1 1 91
DQ266102.1 1 140
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication BRICD5 MIR6859-4 SSTR5-AS1 RNF151 FBXL16 RHBDL1 LOC652276 FLJ42627 SNORA78 E4F1 NARFL JMJD8 NPRL3 MIR3677 NTHL1 PTX4 LINC00254 DNASE1L2 HBA1 NDUFB10 MIR662 MPG CHTF18 POLR3K SNHG19 ABCA3 SNORD60 MAPK8IP3 ATP6V0C LOC100287175 BAIAP3 NHLRC4 SNHG9 SSTR5 MLST8 RPS2 CCDC154 HS3ST6 IFT140 HBZ WDR90 WDR24 MCRIP2 UBE2I PKD1 CRAMP1 TSC2 TSR3 WFIKKN1 LINC00235 LUC7L CCNF C16orf91 FAM234A LOC105371046 NME4 LOC105371038 SLC9A3R2 MIR6511B1 MIR4717 CCDC78 CAPN15 CASKIN1 MSLN LOC105371049 CACNA1H LOC107984876 TMEM204 DDX11L10 ERVK13-1 LOC100134368 EME2 MSRB1 TRAF7 WASIR2 HAGHL ECI1 FAM173A LOC107987233 LOC101929280 KCTD5 NTN3 HAGH NPW MIR1225 IGFALS RPL23AP5 CLCN7 AMDHD2 DECR2 FAHD1 MIR6767 UNKL MEIOB MRPL28 NOXO1 MIR940 MRPS34 SPSB3 PRSS29P METRN HN1L MIR3178 STUB1 HBM ZNF598 PGP GFER LOC105371184 TBC1D24 LOC105371045 PRR35 C1QTNF8 PIGQ LOC729652 TBL3 MIR3180-5 METTL26 C16orf59 TPSD1 RHBDF1 NUBP2 RGS11 TPSAB1 PDIA2 TELO2 CEMP1 RHOT2 SYNGR3 MIR5587 MIR4516 RPL3L GNPTG TMEM8A LMF1-AS1 LOC105371047 ABCA17P RAB40C SNORA64 HBQ1 SNRNP25 ARHGDIG SNORA10 SOX8 TPSG1 PRR25 HBA2 RAB26 NME3 MIR3177 PDPK1 AXIN1 RPUSD1 PRSS27 LOC106660606 TPSB2 MIR6768 MIR3176 GNG13 LMF1 RAB11FIP3 RNPS1
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss MIR940 MIR3677 LOC106660606 MIR4717 ABCA17P ABCA3 RNPS1
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain BRICD5 LOC729652 AMDHD2 MIR6767 MIR3180-5 LOC652276 C16orf59 PKD1 TSC2 E4F1 CEMP1 MIR4516 MIR940 CCNF MIR3677 DNASE1L2 MIR3178 MIR6511B1 MIR4717 ABCA17P CASKIN1 LOC105371049 PGP SNHG19 ABCA3 TRAF7 SNORD60 ATP6V0C TBC1D24 RAB26 ECI1 PDPK1 LOC106660606 MLST8 MIR6768 NTN3 MIR1225 RNPS1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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