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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341248 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07405640_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1 1 327
AK095200.1 1 278
DQ266102.1 1 327
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FAM234A METRN MIR5587 C16orf91 TSC2 TELO2 RHOT2 NUBP2 CHTF18 PTX4 AXIN1 ERVK13-1 DECR2 CACNA1H HBQ1 LOC652276 TPSB2 HBA2 NDUFB10 RAB26 FAHD1 STUB1 SNORA64 LINC00235 LOC105371184 MIR3176 TPSD1 HAGHL MIR6768 SNORA10 RPUSD1 LOC106660606 TBC1D24 LOC105371038 PGP IGFALS POLR3K AMDHD2 MIR4717 PDIA2 ARHGDIG ATP6V0C LOC729652 CRAMP1 RNF151 LOC107987233 RNPS1 MRPL28 BAIAP3 HAGH LOC100134368 RGS11 SPSB3 MIR3177 NARFL HBZ TMEM8A LMF1 CLCN7 MIR3178 NPW PRSS29P TSR3 MPG SNORA78 DDX11L10 LOC105371046 NOXO1 UNKL HBM ABCA17P GFER LOC107984876 NHLRC4 MRPS34 SLC9A3R2 SNHG9 LOC105371049 MLST8 SNHG19 SYNGR3 NME3 RPL23AP5 C16orf59 NME4 MIR6511B1 RHBDF1 TBL3 MIR662 EME2 UBE2I HBA1 LMF1-AS1 GNPTG PIGQ TPSG1 C1QTNF8 MIR4516 MIR3180-5 CCDC154 MSLN WDR90 MEIOB PKD1 WASIR2 MSRB1 TRAF7 LUC7L FLJ42627 MAPK8IP3 LOC101929280 ZNF598 CEMP1 HS3ST6 SNORD60 SNRNP25 RAB40C PRR35 METTL26 E4F1 MIR6767 CCNF WFIKKN1 BRICD5 IFT140 NTN3 NTHL1 DNASE1L2 HN1L FAM173A LOC105371047 RPL3L WDR24 NPRL3 RAB11FIP3 TMEM204 SSTR5 TPSAB1 ECI1 MIR940 CASKIN1 ABCA3 MCRIP2 SOX8 CCDC78 MIR1225 LOC105371045 LOC100287175 PRSS27 RHBDL1 PDPK1 SSTR5-AS1 GNG13 FBXL16 JMJD8 PRR25 MIR6859-4 MIR3677 KCTD5 LINC00254 CAPN15 RPS2
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss ABCA17P LOC106660606 MIR3677 MIR940 RNPS1 MIR4717 ABCA3
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR6767 C16orf59 CCNF MIR6511B1 ATP6V0C LOC729652 BRICD5 NTN3 DNASE1L2 RNPS1 TSC2 MIR4516 ECI1 MIR940 CASKIN1 ABCA3 LOC652276 MIR3180-5 MIR1225 RAB26 PKD1 PDPK1 TRAF7 MIR3178 MIR6768 ABCA17P LOC106660606 TBC1D24 MIR3677 PGP CEMP1 SNORD60 AMDHD2 LOC105371049 MIR4717 MLST8 SNHG19 E4F1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

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