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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2341666 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07405984_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1
AK095200.1
DQ266102.1
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR940 PTX4 HBA2 TRAF7 FAM173A SSTR5-AS1 UNKL GFER METTL26 SNORD60 FAM234A HBM NPRL3 LOC100287175 C16orf59 SNORA64 CCDC154 MIR3177 TBL3 NME3 SNORA10 ABCA17P FBXL16 LOC729652 RPL3L ABCA3 LOC107984876 SSTR5 MIR662 PRR25 NPW LOC105371184 DECR2 NUBP2 C16orf91 LMF1 RPL23AP5 MIR3677 NTHL1 MIR5587 WDR90 ATP6V0C CAPN15 LOC101929280 WASIR2 JMJD8 SOX8 LOC105371038 NHLRC4 RPUSD1 IGFALS LMF1-AS1 MIR6768 TPSB2 CASKIN1 GNPTG RPS2 LINC00254 CEMP1 LOC106660606 SLC9A3R2 SNHG9 C1QTNF8 LOC100134368 HBQ1 MRPL28 LOC105371046 TPSD1 SYNGR3 TSR3 PGP SNRNP25 WDR24 TMEM204 LUC7L RGS11 NTN3 TPSG1 AXIN1 ERVK13-1 IFT140 NME4 SNHG19 MSLN METRN GNG13 UBE2I MCRIP2 MIR6511B1 HBA1 CLCN7 HAGHL LOC105371045 MEIOB MIR3176 CACNA1H ZNF598 MIR3180-5 HAGH TELO2 NOXO1 MIR4717 AMDHD2 CCNF BRICD5 TPSAB1 RHOT2 RHBDF1 LINC00235 TBC1D24 PIGQ PRSS27 RAB40C CRAMP1 HN1L MAPK8IP3 RNPS1 STUB1 SNORA78 POLR3K DDX11L10 EME2 RHBDL1 MIR1225 PDIA2 KCTD5 MSRB1 MLST8 MIR6767 FLJ42627 DNASE1L2 MRPS34 SPSB3 RNF151 LOC652276 CHTF18 MIR6859-4 RAB11FIP3 PRSS29P NARFL PDPK1 RAB26 LOC105371049 E4F1 MIR3178 HS3ST6 ARHGDIG MIR4516 NDUFB10 TMEM8A PKD1 LOC107987233 BAIAP3 CCDC78 TSC2 ECI1 WFIKKN1 FAHD1 LOC105371047 PRR35 HBZ MPG
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss LOC106660606 MIR940 ABCA17P ABCA3 MIR4717 RNPS1 MIR3677
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain SNHG19 MIR940 ATP6V0C TRAF7 MIR1225 MLST8 MIR6767 MIR6511B1 DNASE1L2 SNORD60 MIR6768 LOC652276 CASKIN1 C16orf59 CEMP1 LOC106660606 ABCA17P MIR3180-5 PDPK1 RAB26 LOC105371049 E4F1 MIR4717 MIR3178 AMDHD2 CCNF LOC729652 MIR4516 BRICD5 TBC1D24 PGP ABCA3 NTN3 PKD1 TSC2 ECI1 RNPS1 MIR3677

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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