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See other ABCA17P CNV Assays ›
Gene Symbol
ABCA17P
Assay Reference Genome
Location

Chr.16:2342182 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07406319_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 650655

Gene Name:

 ATP binding cassette subfamily A member 17, pseudogene

Gene Aliases:

 ABCA17

Location:

 Chr.16:2340922-2426699 on Build GRCh38

Assay Gene Location:

 Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ABCA17P NR_003574.1
AK095200.1
DQ266102.1
DQ660314.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBA1 LOC652276 NPRL3 RAB11FIP3 RAB26 ARHGDIG BRICD5 SLC9A3R2 LOC106660606 FAM173A CHTF18 CASKIN1 SNHG9 LOC105371046 EME2 LUC7L BAIAP3 MRPL28 TSR3 MPG LINC00254 TELO2 WASIR2 NTN3 FAM234A SYNGR3 RNF151 SNORD60 TPSAB1 MIR5587 C16orf59 MCRIP2 MRPS34 SPSB3 PKD1 IGFALS MIR940 SNRNP25 NDUFB10 MIR3180-5 RPL3L LOC105371049 CCDC154 METTL26 ERVK13-1 NME4 MAPK8IP3 TPSG1 C1QTNF8 HS3ST6 TBL3 NUBP2 PRSS29P ECI1 PRR25 STUB1 ABCA17P FLJ42627 RHBDF1 TSC2 LOC107984876 LOC105371038 NTHL1 MLST8 MIR4717 WDR90 DECR2 LOC100134368 UBE2I LINC00235 SNHG19 SNORA64 ABCA3 LOC100287175 PRR35 SSTR5-AS1 TMEM204 C16orf91 RPS2 PTX4 MEIOB MIR6768 NARFL GNPTG MIR6859-4 TPSD1 AMDHD2 HBA2 RPUSD1 GNG13 ATP6V0C CCDC78 HBZ CCNF LOC105371047 RHBDL1 ZNF598 SNORA10 MIR4516 GFER CEMP1 TMEM8A NHLRC4 SSTR5 MIR3176 PGP LOC107987233 RPL23AP5 TBC1D24 LOC105371184 MIR3677 WFIKKN1 MSLN IFT140 E4F1 JMJD8 DNASE1L2 AXIN1 MIR6511B1 LMF1 MSRB1 DDX11L10 MIR662 PRSS27 PDPK1 HBQ1 LOC729652 UNKL LOC105371045 CLCN7 RAB40C NME3 MIR3177 SNORA78 PIGQ MIR1225 LMF1-AS1 WDR24 RNPS1 SOX8 RHOT2 HAGHL CRAMP1 MIR3178 CACNA1H FBXL16 NPW PDIA2 NOXO1 CAPN15 METRN MIR6767 KCTD5 HBM TRAF7 RGS11 LOC101929280 HN1L HAGH TPSB2 FAHD1 POLR3K
nsv571201 Chr.16:2255538 - 2365929 on Build GRCh38 Loss RNPS1 LOC106660606 MIR4717 MIR3677 MIR940 ABCA17P ABCA3
nsv1131103 Chr.16:2340199 - 2343199 on Build GRCh38 Deletion ABCA17P ABCA3
nsv827512 Chr.16:2339663 - 2342655 on Build GRCh38 Gain ABCA17P ABCA3
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain MIR3180-5 PDPK1 LOC105371049 LOC729652 AMDHD2 LOC652276 ATP6V0C CCNF MIR1225 RAB26 BRICD5 RNPS1 LOC106660606 CASKIN1 ECI1 MIR4516 MIR3178 CEMP1 ABCA17P TSC2 PGP MLST8 MIR4717 TBC1D24 MIR3677 NTN3 SNHG19 E4F1 ABCA3 SNORD60 DNASE1L2 C16orf59 MIR6767 MIR6511B1 TRAF7 MIR6768 PKD1 MIR940

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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